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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MELO3C012426P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
GATA |
Protein Properties |
Length: 354aa MW: 38260.9 Da PI: 5.9801 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C012426P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55 | 1.1e-17 | 260 | 293 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C +C tkTp+WR gp g+ktLCnaCG++y++ +
MELO3C012426P1 260 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 293
99*****************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0007623 | Biological Process | circadian rhythm |
GO:0009845 | Biological Process | seed germination |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MIGNNFVDEI DCGSFFDQID DLLDFPVEDV DTGLPPAKGG DSTNSFPTIW PTHSESLPGS 60 DSVFSANSNS DLSAELSVPY EDIVQLDWLA NFVEDSFCGG SLTMNKEEPK DLTHNQFQTS 120 SPVSVLESSS SCSSDKTLQP RSPEPTVATP GQQRGRARSK RPRPATFNPR PPIQLISPAS 180 SVTETTTPDQ TLQLVPKAPS DTENFAESRP SVKLPKHGAA ASGTQKIKNK KIKLSFSLAP 240 PLEAGAGNQN LPSSQSVRKC MHCEITKTPQ WRAGPMGPKT LCNACGVRYK SGRLFPEYRP 300 AASPTFIPSL HSNSHKKVLE MRNKTDENTA AITISVQPEL IPNPNSAISM DYM*
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