PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C011550P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 467aa    MW: 51653.9 Da    PI: 6.5133
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C011550P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.9e-10179220344
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                     + k  rr+++NReAAr+sR+RKka++++Le+  + L +  ++
  MELO3C011550P1 179 DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRQRLAQLEQE 220
                     56889************************9765555444443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.6E-8173226No hitNo description
SMARTSM003381.9E-6177244IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.484179223IPR004827Basic-leucine zipper domain
PfamPF001703.7E-7180220IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.04E-7181224No hitNo description
CDDcd147081.24E-20181233No hitNo description
PROSITE patternPS000360184199IPR004827Basic-leucine zipper domain
PfamPF141444.3E-30265338IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MQSFENPEQF YAHSSSSSIF LRGDDSGRFH TRFLPDIEEL QQSAAAIATF HQDDAVDLSP  60
SSVFGLKSTH NTAFPIHLPY GNTDVGSIGR RGYLDTGQEL MRLKRVAPPH SLAVTVAASS  120
SLGNGSFENW GESAMADNSQ QTDTSTDIDN DERHQFQGAV HGALMAVDSM DQSKAKSADQ  180
KTLRRLAQNR EAARKSRLRK KAYVQQLENS RQRLAQLEQE LHRARQQGIF VTSGVGDHCA  240
SMAGNGALAF DLDYARWLDE HQRLINDLRA SANSQLGDDE LRFLVDGVMT HYDELFRLKS  300
VGAKADVFHI LSGMWKTPAE RCFMWLGGFR SSELLKIVGS HLEPLTDQQL MGICNLQQSS  360
QQAEDALSQG IEALQQSLVE TLSSASLGPA SSGNVADYMG QMAIAMSKLT TLENFLHQAD  420
LLRQQTLQQM HRILTTRQAA RALLVISDYI SRLRALSSLW LARPKE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818171e-150LN681817.1 Cucumis melo genomic scaffold, anchoredscaffold00015.
GenBankLN7132571e-150LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008445646.10.0PREDICTED: transcription factor HBP-1b(c38) isoform X2
SwissprotQ415581e-173HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A1S3BDX10.0A0A1S3BDX1_CUCME; transcription factor HBP-1b(C38) isoform X2
STRINGXP_008445645.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60223149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-154bZIP family protein