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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C010724P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
Trihelix |
Protein Properties |
Length: 398aa MW: 45412.8 Da PI: 6.4585 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C010724P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 84.8 | 1.1e-26 | 73 | 154 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W ++e++ Li++rrem+ ++++k++k+lWe++s+kmrergf rsp++C++kw+nl k++kk k+++++ s +++ ++++e
MELO3C010724P1 73 WVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHQDRGS---GSAKMSCYKEIE 154
*******************************************************************984...445778888886 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MYLSDKPRPI DIYKEEGSRD MMIEVASNGD HHIQPHQPQP QPQQTHQQHQ MMLGDSSGED 60 HEVKAPKKRA ETWVQDETRS LIALRREMDG LFNTSKSNKH LWEQISAKMR ERGFDRSPTM 120 CTDKWRNLLK EFKKAKHQDR GSGSAKMSCY KEIEEILKER SKSTQYKSPT PPKIDSYMQF 180 SDKGIEDNGL SFGPVEGGRP SLNLERQLDH DGHPLAITAA DAVAATGIPP WNWREAPGNG 240 GESQAFGGRV ISVKWGDYTR RIGVDGTAEA IKEAIKSAFG LRTKRAFWLE DEDQVVRSLD 300 RDMPLGNYTL HLDEGVAVKI CLYDESNHLP VHSEDKVFYI EEDYRDFLAR RGWTSLREFD 360 GYRNIDNIDD LRSGALYRRN IDNMDDLRPG AIYRGVS*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specifically to the core DNA sequence 5'-GGTTAA-3'. May act as a molecular switch in response to light signals. {ECO:0000269|PubMed:10437822, ECO:0000269|PubMed:15044016, ECO:0000269|PubMed:7866025}. |