 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MELO3C009948P2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 284aa MW: 32087.7 Da PI: 4.4986 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C009948P2 | genome | MELONOMICS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 65 | 1e-20 | 69 | 122 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t++q++ Le+ Fe+++++ e++ +LAkklgL+ rqV vWFqNrRa++k
MELO3C009948P2 69 KKRRLTHDQVQMLEKNFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 122
56789************************************************9 PP
|
| 2 | HD-ZIP_I/II | 133.3 | 8.5e-43 | 68 | 159 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+++qv++LE++Feee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l+++ +++ ke++ L++e++
MELO3C009948P2 68 EKKRRLTHDQVQMLEKNFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDSLVSNYDAIVKENAVLKSEVA 159
69**************************************************************************************9987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MESGRFLFNP PPYGGNMLYL GGAGGDPCLR GGRTMMSMSM NESPKGRPFF RSPDDLYDDE 60
YYDEFYPEKK RRLTHDQVQM LEKNFEEENK LEPERKSQLA KKLGLQPRQV AVWFQNRRAR 120
WKTKQLERDY DVLKASYDSL VSNYDAIVKE NAVLKSEVAS LTEKCLAKEL DGGEATIPSI 180
TSELLLADIT NISIPQSGRK AEDRLSSGSD SSAVVDDNCP QLIDSGDSYF PSIEYPQCAH 240
LPNGLQMEDN DTNDNSNYLF SDMFATTNQQ SQEGRPPAWW AWS*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 116 | 124 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:8535134}. |
