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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MELO3C009307P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
AP2 |
| Protein Properties |
Length: 364aa MW: 40873.8 Da PI: 6.6652 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C009307P1 | genome | MELONOMICS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 54.2 | 3.6e-17 | 159 | 208 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
MELO3C009307P1 159 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 208
78*******************......55************************997 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MLDLNLEVVS SESASDSVEM VTDRFMQFSA NRMESAGSFN SSSVVNGDLS ASTTGDEDSS 60
SNADEAFPFT FGKDYADQES LTAKSLCVFD DHRDQTMELF PLTGGLSSGS SPLERCPEVS 120
PSEFSYCGGA PERRIPAPPT QQQHQPMKKN RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC 180
GKQVYLGGFD TAHAAARAYD RAAIKFRGID ADINFNVCDY DEDIKQMSNF TKEEFVHILR 240
RHRTGFSRGS SKYRGVTLHK CGRWEARMGQ FLGKKAYDKA ALRCNGKEAV TNFEPSSYVA 300
EMASETDIGG LFLLCLYNLL FDHCHFVVLV LNDLVWSTGL HLMISIQYRK LSLFPLCREQ 360
PNY*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
