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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C009305P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
MYB_related |
Protein Properties |
Length: 293aa MW: 32387.7 Da PI: 8.4203 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C009305P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 34.9 | 3.7e-11 | 35 | 83 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
r +WT+eE++++++a +++ + Wk+I +g + q++s+ qky
MELO3C009305P1 35 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVGsktVIQSMLQIRSHAQKY 83
789*****************77.*********77744578899***9999 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MNSNASNPNP SMTSSTAADS SGKKVRKPYT ITKSRESWTE EEHDKFLEAL QLFDRDWKKI 60 EDFVGSKTVI QSMLQIRSHA QKYFLKVQKN GTIAHVPPPR PKRKASHPYP QKASKNVLLP 120 LQASMGYPSS VNTLAPGYSP WDDASIMINP SLSKIMQPQD EFTNLHRSEN DIASEGTPMI 180 SSSSLNGIGS PDMGKQGKQA PMLHGIPDFA EVYGFIGSIF DPDSKEHVNK LKEMDPINFE 240 TVLLLMRNLS FNLSSPDFEP LRTVLSTYDV NTKTVAVTAG MPTKKHADDI SC*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator of evening element (EE)-containing clock-controlled genes. Forms a negative feedback loop with APRR5. Regulates the pattern of histone H3 acetylation of the TOC1 promoter. {ECO:0000269|PubMed:21205033, ECO:0000269|PubMed:21474993, ECO:0000269|PubMed:21483796, ECO:0000269|PubMed:23638299}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Circadian-regulation. Peak of expression in the afternoon. Down-regulated by cold. {ECO:0000269|PubMed:21205033, ECO:0000269|PubMed:22902701, ECO:0000269|PubMed:23638299}. |
Publications
? help Back to Top |
- Manfield IW, et al.
Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis. Nucleic Acids Res., 2006. 34(Web Server issue): p. W504-9 [PMID:16845059] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Fogelmark K,Troein C
Rethinking transcriptional activation in the Arabidopsis circadian clock. PLoS Comput. Biol., 2014. 10(7): p. e1003705 [PMID:25033214] - Xing H, et al.
LNK1 and LNK2 recruitment to the evening element require morning expressed circadian related MYB-like transcription factors. Plant Signal Behav, 2015. 10(3): p. e1010888 [PMID:25848708] - Gray JA,Shalit-Kaneh A,Chu DN,Hsu PY,Harmer SL
The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size. Plant Physiol., 2017. 173(4): p. 2308-2322 [PMID:28254761]
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