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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C006016P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
bHLH |
Protein Properties |
Length: 587aa MW: 65067.9 Da PI: 5.5637 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C006016P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 40.5 | 4.8e-13 | 415 | 461 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq
MELO3C006016P1 415 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 461
799***********************66......******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 587 aa
Download sequence Send
to blast |
MKIEDGLRSV GGKDEDKTVV AAVLGTRAFN YLMSCSVSNE NLFMAVRNDE NLQNKLSDLV 60 ERPNASNFSW NYAIFWQLSH SKSGEWVLGW GDGSCRDPRD GDETEATQIL SLQLEDESQQ 120 RMKKRALQKL HTLFGGSDED NYALGLDRVT DTEIFFLLPC ISHSLVEREA LGSTVVLVPT 180 DVGVVELGSV RSVNESVELV QFIRSLFSSQ LSLDRVRSSA AMSMIAERKD ESTPFVSWGI 240 ADRGEGGAGI PKVFGQTLNS GNMGRSHFRE KLAIRKMDER SWEACANGGR IQFQSPRNGI 300 RSPSLAHVHG LKQGNHSPAE IYVSPTPPVN NNHEQLVSGV RDEFGLNPYQ SQKLAQMQID 360 FSVATSRPSV INRVGADSEH SDVEPQCKEE GPGTDERRPR KRGRKPANGR EEPLNHVEAE 420 RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAIAYINEL QEKVKIMEFE REKSSLTSSE 480 ATPSEGNPEI ENKDQFLDVE IDVEAAHDEV IVKVSCPLES HPASRVIKAM RDAQINVIDS 540 KLSEANDKVL HTFVIKSPGS EQLTKEQLIA AFSRDSTSLH PLSTVG*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 4e-29 | 409 | 471 | 2 | 64 | Transcription factor MYC2 |
5gnj_B | 4e-29 | 409 | 471 | 2 | 64 | Transcription factor MYC2 |
5gnj_E | 4e-29 | 409 | 471 | 2 | 64 | Transcription factor MYC2 |
5gnj_F | 4e-29 | 409 | 471 | 2 | 64 | Transcription factor MYC2 |
5gnj_G | 4e-29 | 409 | 471 | 2 | 64 | Transcription factor MYC2 |
5gnj_I | 4e-29 | 409 | 471 | 2 | 64 | Transcription factor MYC2 |
5gnj_M | 4e-29 | 409 | 471 | 2 | 64 | Transcription factor MYC2 |
5gnj_N | 4e-29 | 409 | 471 | 2 | 64 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 396 | 404 | RRPRKRGRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}. |