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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MELO3C005807P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
B3 |
Protein Properties |
Length: 398aa MW: 44400.3 Da PI: 7.4742 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C005807P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 99.2 | 2.5e-31 | 57 | 161 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89
f+kv tpsdv+k++rlv+pk++ae++ ++ + ++ l +ed++g+sW+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ +
MELO3C005807P1 57 FDKVVTPSDVGKLNRLVIPKQHAERFfpldSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGiGEiGR 151
89***************************9555568889************************************************65599999 PP
E..EEEEE-S CS
B3 90 felvvkvfrk 99
+l++ ++r+
MELO3C005807P1 152 DRLYIDWRRR 161
9999999997 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MNFGVNTLQN HHLQPRNRLD LIMMEPPEAE EEAGGGSNSG SGSGGRGGEV VEREHMFDKV 60 VTPSDVGKLN RLVIPKQHAE RFFPLDSSTN DKGLLLNFED RNGKSWRFRY SYWNSSQSYV 120 MTKGWSRFVK EKRLDAGDIV SFQRGIGEIG RDRLYIDWRR RPELPLHHYP ITTTTTAIRP 180 SIVIPSGSGA TAAWGPLVWQ PLGVTTAGYH HQPAAVTPRD HTHLPRNNNN SNNNNGNGMC 240 CPYGYGSSGV ETTSSGLVYL RTELGGKSSR RVIGTPRLGE DQELELEMDR NFNNYQMQQE 300 YCSNGGGGAS MVVLQGNYSM ENHHHHHQKL NNNNNNNYSE EDTPVKKSRL RLFGVNMEME 360 SPISSPSSDE CDLLLSTNPK TTTSTTQFQL PSPSIYK*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 9e-68 | 50 | 164 | 1 | 116 | B3 domain-containing transcription factor NGA1 |
5os9_B | 9e-68 | 50 | 164 | 1 | 116 | B3 domain-containing transcription factor NGA1 |
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