 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MELO3C004630P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
HSF |
| Protein Properties |
Length: 367aa MW: 42021.7 Da PI: 6.5233 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MELO3C004630P1 | genome | MELONOMICS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 112.5 | 2.9e-35 | 60 | 151 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96
Flkk+ye++ed+e++ ++swse+ +sf+v+d+++++k +LpkyFkhsnf+SF+RQLn+YgF+k+++++ weF+++ F+ gkk+ll++
MELO3C004630P1 60 FLKKTYEMVEDPETDPVVSWSETRKSFIVWDSHQLSKFLLPKYFKHSNFSSFIRQLNTYGFRKIDSDK---------WEFANEGFQGGKKHLLKN 145
9****************************************************************999.........****************** PP
XXXXXX CS
HSF_DNA-bind 97 ikrkks 102
ikrk++
MELO3C004630P1 146 IKRKNK 151
****87 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 367 aa
Download sequence Send
to blast |
MILPDDGAET GSGESVDEKM SQVVKGEEEI DEVSTAATMN KGGVWAKPME GLHDLGPPPF 60
LKKTYEMVED PETDPVVSWS ETRKSFIVWD SHQLSKFLLP KYFKHSNFSS FIRQLNTYGF 120
RKIDSDKWEF ANEGFQGGKK HLLKNIKRKN KYNNNFKKQH LGLSINNTTL EDLTKPLLVE 180
TELLQTLKTD NNILRVEMSK LREQQQDSHN QLTLVEERVR CAESKHQQMF YFLAKMSRNP 240
AFCRQLIQKR MLRKKMELSN GDHEFGKKRK LLAVQAHQNQ VQEELSTLHS ELTEMFPEVI 300
EPGPGPIGTV FRESIDDDRS ENMVVDEGLS SNDSFLKLDD LIKKPQDCPS GYVQKQAFYG 360
FVGSLP*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 2ldu_A | 2e-23 | 58 | 149 | 18 | 120 | Heat shock factor protein 1 |
| 5d5u_B | 1e-23 | 58 | 149 | 27 | 129 | Heat shock factor protein 1 |
| 5d5v_B | 1e-23 | 58 | 149 | 27 | 129 | Heat shock factor protein 1 |
| 5d5v_D | 1e-23 | 58 | 149 | 27 | 129 | Heat shock factor protein 1 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 252 | 269 | RKKMELSNGDHEFGKKRK |
