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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C003372P1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
MYB_related |
Protein Properties |
Length: 310aa MW: 34291.3 Da PI: 8.9957 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C003372P1 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 21.8 | 4.3e-07 | 250 | 292 | 3 | 43 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43
W+ Ed l++a k ++++ +W++Ia+ ++ g+t c r
MELO3C003372P1 250 GWSSGEDIALLNALKAFPKDsamRWEKIAAAVP-GKTKAACMKR 292
6********************************.******9876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MEFLDEDAKP RFLFHSRANP SPAMELQSDS QSTKLFLSIT VVISSIFLIL SIVFVQFEPF 60 RSLFIWLSLS LLVGPFAPIS LTGGDIRVGR GPILEIPDEE LEAEDDSKKK PVQKRSKARR 120 SNDEIAVASI VVAEKSSAKI DNRNGVGHQS NKNGVDFAIE EAEWDDAELG FLKKQLAKHP 180 VGKPRRWEII AEAFGGRHKV ENVIKMAKEM GEKKLGDEDS YAQFLKNRKP MDKRIENVNE 240 EAPTAAVAGG WSSGEDIALL NALKAFPKDS AMRWEKIAAA VPGKTKAACM KRVGELKRDF 300 RNSKAGNEI*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in the regulation of root hair development, possibly through auxin signaling. Its endoplasmic reticulum membrane localization is not compatible with its transcription factor activity in the nucleus. May be cleaved to target the nucleus. {ECO:0000269|PubMed:21477080}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by auxin. {ECO:0000269|PubMed:21477080}. |