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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MELO3C002209P2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
HD-ZIP |
Protein Properties |
Length: 334aa MW: 37254 Da PI: 4.4126 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MELO3C002209P2 | genome | MELONOMICS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 60.5 | 2.7e-19 | 99 | 152 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t +q++ Le+ Fe ++++ e++ +LAk lgL+ rqV +WFqNrRa++k
MELO3C002209P2 99 KKRRLTVDQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWK 152
56689************************************************9 PP
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2 | HD-ZIP_I/II | 130.2 | 8.4e-42 | 98 | 188 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrl+ +qv++LE+sFe+e+kLeperKv+la++Lglqprqva+WFqnrRAR+ktkqlEkdyeaL+++y +lk + e+L ke+++L++e+
MELO3C002209P2 98 EKKRRLTVDQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYEALQSSYGSLKVDYENLLKEKDSLKAEI 188
69**************************************************************************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MAGRRVYGGD DGGSISGGSS NHSVLLQNCG GSFASEPLNA LFLSGSSSSS SPSLLGSRSM 60 MSFEDIRGGN GSNRSFFCPL DSEDNGDEDL DDYFHHPEKK RRLTVDQVRF LEKSFETENK 120 LEPERKVQLA KDLGLQPRQV AIWFQNRRAR WKTKQLEKDY EALQSSYGSL KVDYENLLKE 180 KDSLKAEILL LTDKLLHKEK ERGNSVLSEV DKFGEELPHN LVADSNLEDE VSKSSKLGCK 240 QEDISSVKSD LCDSDSPHYT DGVHSSLLEP GDSSYIFDPD QSDLSQDEED NLGRNLLPPY 300 IFPKLEDVDY SDPPTSSCNF VFPIEDNALW SWS*
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Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 146 | 154 | RRARWKTKQ |