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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000907929 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
ERF |
Protein Properties |
Length: 279aa MW: 31107.9 Da PI: 5.4251 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000907929 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.6 | 2e-20 | 129 | 179 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+++AeIrdp++ng +r++lg++ tae+Aa a+++a+ k++g
MDP0000907929 129 HFRGVRRRP-WGKYAAEIRDPKKNG--ARVWLGTYETAEGAALAYDQAAFKMRG 179
69*******.***********9998..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MYQDICLEFD FAXLESIRQH LLDDDFDTTF QESSPTASDS PXPMYSRSLS FSTLFSTESW 60 RDMPFKVELE DTNEVVGALS NGTDGWSSSS DHHHVDVIDT TPVKPEPQKV VREEIVAARE 120 THTPPSRQHF RGVRRRPWGK YAAEIRDPKK NGARVWLGTY ETAEGAALAY DQAAFKMRGS 180 KAKLNFPHLI GSEGYEPVRV TXKRRAPEFS TSSSSSESRS PKPKRRNTGL CLVVEAESGS 240 TSRVEMVEMS QLAAVDQWLS DLNTTVSSMP NELLISGL*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Weakly expressed in roots. {ECO:0000269|PubMed:10945353}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU732455 | 0.0 | GU732455.1 Malus x domestica AP2 domain class transcription factor (AP2D31) mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G44840.1 | 1e-44 | ethylene-responsive element binding factor 13 |