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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MDP0000852158 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
MYB |
Protein Properties |
Length: 352aa MW: 40180.3 Da PI: 9.7639 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000852158 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.9 | 4.7e-18 | 15 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ede+l ++v+q+G +W++Ia++++ gR++k+c++rw++
MDP0000852158 15 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 60
899*****************************.***********996 PP
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2 | Myb_DNA-binding | 58.8 | 1.3e-18 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++++eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+
MDP0000852158 67 RRPFSEEEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 110
679*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MEDYGDEAKS TGCPRGHWRP AEDEKLRQLV EQYGAQNWNS IAEKLQGRSG KSCRLRWFNQ 60 LDPRINRRPF SEEEEERLLA AHRIHGNKWA LIARLFPGRT DNAVKNHWHV IMARRQREQS 120 KVCGKKSFQD FFNDHSPNSS SISNNFDASR KLRSQGSSIG FGRNNISTKF LEFQNPNKDR 180 AMFMDSRPTS SFPYNWNFAS MSTTSNNSSS VDLLGRERRD YINNGSSNYT ISELSKGSHP 240 QLVHRRHNPT SSFLYGCYRG SSSNAFGRPT YSSPFGCPSN HADRLINRQD QHGSTFKEVL 300 PNLYENASTL PKWRVAATTT KFDDHDPQDH VSIDHHKETP FIDFLGVGIS S*
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