 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000794101 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
LBD |
| Protein Properties |
Length: 227aa MW: 24537.5 Da PI: 7.5421 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000794101 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 99.5 | 3.2e-31 | 2 | 102 | 1 | 96 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+C++C+vlr++C++ C+l+p++ p++q++++ +++k+FG+s +l++++a+pe++r+++++sl++eA+ r +Pv+Gavg+++++++q++q++
MDP0000794101 2 SCNGCRVLRKGCSETCILRPCLhwidsPQAQANATLFLAKFFGRSDLLSFVSAVPETQRPALFQSLLFEACGRSVNPVNGAVGLLSSGNWQVCQSA 97
6*********************************************************************************************** PP
DUF260 92 aelal 96
+e++l
MDP0000794101 98 VETVL 102
99876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSETCILR PCLHWIDSPQ AQANATLFLA KFFGRSDLLS FVSAVPETQR 60
PALFQSLLFE ACGRSVNPVN GAVGLLSSGN WQVCQSAVET VLSGGVLRPL PAFTTPSLDE 120
SSDTFSRGTC TXQNRYYQSV PSASAYYGEE RSQPFEPAGL SLKPNLAAGE RGRGRGMRSY 180
ISAAMDQRLR DTVSFDSEES VMTTTTTRCL ESGGDLKDCK LLNLFV*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
