PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000782908
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 598aa    MW: 67356.5 Da    PI: 8.6188
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000782908genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.61.9e-12408452554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    h + Er+RR+++N++f++L++llP+      +K +Ka++L+ A eY+ sL
  MDP0000782908 408 HMISERKRREKLNESFHTLKSLLPPG-----TKKDKASVLTTAREYLTSL 452
                    8899********************97.....8***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.523403452IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.09E-11403457No hitNo description
SuperFamilySSF474596.54E-17405473IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-15405470IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-10408452IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.8E-14409458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 598 aa     Download sequence    Send to blast
MTKRHKGRLK CSGEIKRDSH FPPLSMDTAF HLDEGSRANF LRLVMQSFGC FYICLWSYMP  60
PPSNCLFFLD GVYDEENQPS SSSGSLARRL FDEYRLSVFK VFENECVPGF AFRNSISFVE  120
LQEMDLQRLA SDDKQRQFYQ EARIKFPLKL QTAVFMGCKS GEIELGMSNV CQINIKREMM  180
RTWLPEVFPG QLSPHTEVAS RSINGQQQYP LSSSSSSLRS LSTMDSPEYS SLLFNIPTTT  240
TTISHNIPEL FTQLSSNPLQ PINISSLEPL PTKNLITTTS STSTTSPHQQ AIQAISRIRN  300
IQFPTPEIED ATMTRAILAV LSSSPYQPPP QTNPPSSSST TDHHLQTPRA SAFKSYNTSV  360
LAPRTQMSAN LRQQNMHKRS ISFLRSLNLT RLREGIQATR PTSSQLHHMI SERKRREKLN  420
ESFHTLKSLL PPGTKKDKAS VLTTAREYLT SLKAQVAELS KRNQQLEARL LPLASLGANE  480
AAAAAAGSSN ERCSLTVTRV STESSPDQDE QIIDLQVILR SQESCTEDMV IRILEFLKRV  540
ENVSLMSMEA NTWISESNFN INRVILRLRV DQGTEWDEAA FQEAVRRVVA DLVRRID*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1411416ERKRRE
2412417RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017178234.10.0putative transcription factor bHLH041 isoform X1
TrEMBLA0A498HVQ20.0A0A498HVQ2_MALDO; Uncharacterized protein
STRINGXP_008337776.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.15e-58bHLH family protein