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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
MDP0000747679 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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| Family |
LBD |
| Protein Properties |
Length: 289aa MW: 31405.5 Da PI: 8.1087 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000747679 | genome | GDR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 92.5 | 4.8e-29 | 66 | 167 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+C++C+vlr++C++ C+l+ ++ p++q +++ +++k+FG+s +l++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q++
MDP0000747679 66 SCNGCRVLRKGCSDTCILRSCLcwidsPEAQGNATLFLAKFFGRSDLLSFVSAVPENQRPTLFQSLLFEACGRTVNPVNGAVGLLSSGNWHVCQSA 161
6*********************9999999******************************************************************9 PP
DUF260 92 aelall 97
++++l
MDP0000747679 162 VDTVLS 167
998765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MLNQRQKPDQ TPRSDGQIGS EIVAETRSRS VSPRVWKICL DKXVVGPHPM STVICKMEAD 60
RTVEMSCNGC RVLRKGCSDT CILRSCLCWI DSPEAQGNAT LFLAKFFGRS DLLSFVSAVP 120
ENQRPTLFQS LLFEACGRTV NPVNGAVGLL SSGNWHVCQS AVDTVLSGGA LRPLPAFTTP 180
ALDESSDAFS RGACTPKNRY CPSAAAYYDA ERIQPFEAAG LSLRPNLVAA ERGRGKGMWI 240
CVSAAMDQRR RDTVSFDSEE SVMTTTTTRT FESGGGDLKD RKLLNLFV*
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