 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000738604 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 337aa MW: 38967 Da PI: 8.5415 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000738604 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59 | 7.9e-19 | 39 | 92 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+ ++t++qle Le+ F ++ +++ +++ +L+++lgL+ rq+ vWFqNrRa++k
MDP0000738604 39 KKKRLTSDQLESLERSFLEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWK 92
56679************************************************9 PP
|
| 2 | HD-ZIP_I/II | 117.7 | 6.3e-38 | 39 | 128 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
kk+rl+++q+++LE+sF ee kL+p+rK++l+reLglqprq+avWFqnrRAR+k+kqlE+ y+aLk++yd +++e+++L++ev +L++ l
MDP0000738604 39 KKKRLTSDQLESLERSFLEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKQLEHLYDALKQEYDVVSKEKHKLQEEVMKLKTIL 128
9****************9999*****************************************************************9766 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MEMKHQAMIS ETSSQGGLVP GMXDRNNHQS SYGCSSQDKK KRLTSDQLES LERSFLEEIK 60
LDPDRKMKLS RELGLQPRQI AVWFQNRRAR WKAKQLEHLY DALKQEYDVV SKEKHKLQEE 120
VMKLKTILRD EVARKQVSTG YTEISGEETV ESTSVSIRSA NKARGTNQHK IAEYNYLYNV 180
EEYNPFMTHP DPYDTPQPGM STRTPNRAVL ADTWKLINTL KCYDYVKTVR IIAGHLRVET 240
TYSDLYDKIV HLPWIQGERK VREGSVLVVV IEGKCFRNEW ILDEGSSDPW VVLRENRDET 300
SSIKAIIGCW DIMVMFKGDE RLKKARNLDG KPSENT*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB545981 | 2e-35 | AB545981.1 Pyrus pyrifolia genes for F-box proteins, S ribonuclease, complete cds, haplotype: S4. |
