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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000723614 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
MYB |
Protein Properties |
Length: 368aa MW: 39663.1 Da PI: 10.1286 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000723614 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57.1 | 4e-18 | 50 | 97 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEdell++++k+ G g+W+t +++ g+ R++k+c++rw +yl
MDP0000723614 50 RGPWTPEEDELLANYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 97
89******************************99************97 PP
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2 | Myb_DNA-binding | 46.7 | 7.3e-15 | 108 | 148 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
MDP0000723614 108 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 148
89***************.*********.************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010090 | Biological Process | trichome morphogenesis |
GO:0010468 | Biological Process | regulation of gene expression |
GO:0048354 | Biological Process | mucilage biosynthetic process involved in seed coat development |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MRNPSSSSKA AAAASAKMQT TITASSSSSK AAGVAGGTKT PCCAKVGLKR GPWTPEEDEL 60 LANYIKKEGE GRWRTLPKRA GLLRCGKSCR LRWMNYLRPS VKRGQIAPDE EDLILRLHRL 120 LGNRWSLIAG RIPGRTDNEI KNYWNTHLSK KLISQGIDPR THKPLNXDHH SAADDXDVDN 180 TNKSTAVASS SKANDRFSNP NPSPPSDRLV HKEGDPNNSR NDGNIAIADH DLGTIVXGFA 240 NMITSINNPD ASSSAAATGT LSLRSNNSHG GVLLXGGGNE EDDVFSSFLN SLINEDPFPG 300 QHQLQQVLQN GNVSAHAAAA RSENLPLIXM TSVLRRHQHL AGSLLCSCLL LSSKMITRXL 360 MIKRSSS*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Siliques. {ECO:0000269|PubMed:9839469}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1 or BHLH042/TT8. {ECO:0000269|PubMed:15361138}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ020112 | 0.0 | KJ020112.1 Malus hybrid cultivar MYB12a protein (MYB12a) mRNA, complete cds. |