PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000705786 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | NAC | ||||||||
Protein Properties | Length: 542aa MW: 60917.1 Da PI: 5.7672 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 74.5 | 2.5e-23 | 27 | 156 | 3 | 126 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + +rFhPt++e ++L+kk+++++ ++ +++ +d+ k+ePw+Lp +++++ + k wy Fs d k++++ r +r+tk g+Wk g +++v MDP0000705786 27 AAIRFHPTEDEKA-DFLRKKMKNHNSQACLFLPVIDVRKFEPWELPgRMFAEspyQXKAWYSFSWCDYKSNNSPRFKRKTKXGFWKMNGXQRDVGP 121 568********99.9**********999888***************542222455788************************************88 PP NAM 95 kkgelvglkktLvfy.....kgrapkgektdWvmhey 126 + + k+tL+f +gr++k++ t+W mhey MDP0000705786 122 --KYFTCKKRTLTFKkktfqEGRRSKSVTTSWKMHEY 156 ..445566677777755555899************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.32E-28 | 13 | 185 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 26.978 | 25 | 185 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-10 | 28 | 156 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 542 aa Download sequence Send to blast |
MKNFSSSSSS TSMXTTTTAQ SVPDMVAAIR FHPTEDEKAD FLRKKMKNHN SQACLFLPVI 60 DVRKFEPWEL PGRMFAESPY QXKAWYSFSW CDYKSNNSPR FKRKTKXGFW KMNGXQRDVG 120 PKYFTCKKRT LTFKKKTFQE GRRSKSVTTS WKMHEYIRIK PERGSSPHQA RDQQRGFVLC 180 VLKYKPVDXX XNKKKLKGTS ICGDFADSTG NRGYIASTSG ADEAATAAAT NHMSPDTEEV 240 LAYKQLEHDL LGSGNQDDGE PAGGSSSDFN QSLRDMIQEV WWQLCSPAGE DLNSLFPLPE 300 PPQPHQPPQL GNAPDVCSGE LVDPGTSGCI TYNTDNQAAT MNHMISDTEE XLAYKQLERD 360 VFAGGNHDVG ERGSGILTFG DGNDETGGWK FSDFDDQAAS DRFQELFXEM GEILNSSSQP 420 LQPHQPXQPH QPQEYSPSTL QQSLFPDNIS YPEYKNNIST NDPNEQVNKL ANGVPIXATD 480 ERISVEENSE YRFRAFGYAA EXHHLTRTDD SMHEYVDPAA RTTVSYQNLS RILQIXXILC 540 I* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-15 | 13 | 156 | 3 | 138 | Stress-induced transcription factor NAC1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008359670.2 | 0.0 | NAC domain-containing protein 74-like | ||||
TrEMBL | A0A498KH05 | 0.0 | A0A498KH05_MALDO; Uncharacterized protein | ||||
STRING | XP_008359670.1 | 0.0 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF38630 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-15 | NAC domain containing protein 28 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000705786 |