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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MDP0000589639 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
HSF |
Protein Properties |
Length: 282aa MW: 31300.7 Da PI: 4.4462 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000589639 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 77 | 3.2e-24 | 99 | 169 | 2 | 71 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTT.EEE---SSBT CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYg.Fkkvkdeekk 71
Fl+k+y++++d++ ++++sws++ sfvv+d+ f ++LpkyFkh+n++SFvRQLn+Yg F++ +++++
MDP0000589639 99 FLNKTYDMVDDPDSNQVVSWSRERGSFVVWDPYIFVMSLLPKYFKHNNLSSFVRQLNTYGpFEEGEEHSQI 169
9********************999***********************************967666665544 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MAATHTSFYR GSAQHGGMDG GVSNDSKVKV NLQALIMAEN GHKLQQQQLE ESIKLMTTTI 60 LPFILHFNNN LLKEEYPGSS SSQSGPNFDP MVMMIPPPFL NKTYDMVDDP DSNQVVSWSR 120 ERGSFVVWDP YIFVMSLLPK YFKHNNLSSF VRQLNTYGPF EEGEEHSQIE NGIYGFSDQF 180 QLSGSSNAGR ELGFSSPNLD HHSAEFRFLD LGGAGPVEFD SDEWMDRIIC GEDSTDSSNL 240 PSACNTWQGS NPGFDLYGTD SFQPHCLSRL SNPCSLPLNL N*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5d5u_B | 2e-15 | 97 | 158 | 27 | 88 | Heat shock factor protein 1 |
5d5v_B | 2e-15 | 97 | 158 | 27 | 88 | Heat shock factor protein 1 |
5d5v_D | 2e-15 | 97 | 158 | 27 | 88 | Heat shock factor protein 1 |