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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000587003 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | NAC | ||||||||
Protein Properties | Length: 160aa MW: 18645.4 Da PI: 7.4332 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55 | 2.7e-17 | 20 | 81 | 1 | 62 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFs 62 l pGfrFhPtdeel+ +yL +k+++ ++++ ++i+ vd++k+ePw+L+ +++ + e++ + MDP0000587003 20 LSPGFRFHPTDEELIICYLMNKINDATFTTXRAIAXVDLNKCEPWELHLHLHLSXLEMFXYR 81 579***************************999**************965555555665554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.49E-16 | 15 | 84 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 10.738 | 20 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.6E-8 | 22 | 116 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MTVHHLLSLL PSDPKEELPL SPGFRFHPTD EELIICYLMN KINDATFTTX RAIAXVDLNK 60 CEPWELHLHL HLSXLEMFXY RXLHPRRHXP KEPQQPPLLL HHKHRNQFWF WXYNFSKGQD 120 PNKVNAIALC RGDLSHDACH TXLNDSINAL LQNCSTHPK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 9e-18 | NAC domain containing protein 38 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000587003 |