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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MDP0000564592 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
NAC |
Protein Properties |
Length: 180aa MW: 20927 Da PI: 10.6785 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000564592 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 74 | 3.6e-23 | 3 | 118 | 22 | 128 |
NAM 22 kvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfy...... 109
kv+ +l++ ++i+e+d+++++Pw Lp v +e++ yfF +++ ++ g +++rat gyWk gk+k+++++ ++e+vg++ktL f
MDP0000564592 3 KVHPAPLPA-SIIPEFDVFETHPWGLPGDV--RETR-YFFYNENMNKYVGINSKRATGCGYWKPIGKKKQIVANskSNEAVGIRKTLGFCerkrrr 94
666667777.78***************554..4445.5555555555579**********************98667778**********777666 PP
NAM 110 .....kgrapkgektdWvmheyrl 128
+++++++++t+W+mheyrl
MDP0000564592 95 chnhhHESTSTTTQTRWLMHEYRL 118
6555436777778*********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 180 aa
Download sequence Send
to blast |
MRKVHPAPLP ASIIPEFDVF ETHPWGLPGD VRETRYFFYN ENMNKYVGIN SKRATGCGYW 60 KPIGKKKQIV ANSKSNEAVG IRKTLGFCER KRRRCHNHHH ESTSTTTQTR WLMHEYRLLA 120 SQANPTQAFK AEVGNWVVFR IFQKKRRPTQ RISDDLGVVS QRSSNCKRNL RLMEEYICS*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-11 | 2 | 145 | 37 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-11 | 2 | 145 | 37 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-11 | 2 | 145 | 37 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-11 | 2 | 145 | 37 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-11 | 2 | 145 | 40 | 169 | NAC domain-containing protein 19 |
3swm_B | 1e-11 | 2 | 145 | 40 | 169 | NAC domain-containing protein 19 |
3swm_C | 1e-11 | 2 | 145 | 40 | 169 | NAC domain-containing protein 19 |
3swm_D | 1e-11 | 2 | 145 | 40 | 169 | NAC domain-containing protein 19 |
3swp_A | 1e-11 | 2 | 145 | 40 | 169 | NAC domain-containing protein 19 |
3swp_B | 1e-11 | 2 | 145 | 40 | 169 | NAC domain-containing protein 19 |
3swp_C | 1e-11 | 2 | 145 | 40 | 169 | NAC domain-containing protein 19 |
3swp_D | 1e-11 | 2 | 145 | 40 | 169 | NAC domain-containing protein 19 |
4dul_A | 1e-11 | 2 | 145 | 37 | 166 | NAC domain-containing protein 19 |
4dul_B | 1e-11 | 2 | 145 | 37 | 166 | NAC domain-containing protein 19 |
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