PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000560255
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 560aa    MW: 62983 Da    PI: 8.2238
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000560255genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.63.3e-0691136653
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                      +Er+RR+ +    + Lr+llP  +    ++K s  e   +Av+YI++
  MDP0000560255  91 RDNERQRRQLMAVLNSSLRSLLPCeL---IKGKRSITEHMNEAVNYINH 136
                    679*********************88...******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.5E-782151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.30E-583142No hitNo description
PROSITE profilePS5088810.85585137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5001132.838256528IPR000719Protein kinase domain
SMARTSM002209.4E-21256528IPR000719Protein kinase domain
PfamPF077147.8E-37266526IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
SuperFamilySSF561123.51E-66274531IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.205.0E-13274335No hitNo description
CDDcd140663.37E-88277530No hitNo description
Gene3DG3DSA:1.10.510.103.5E-42340551No hitNo description
PROSITE patternPS001080379391IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    Send to blast
MFPNSYHHDQ SKDLVFQNSF IDDSHHNDMM QVQDLMRGHE VFPEEKNPSR NKIMRKGKQQ  60
QQQQHMILSP NSSNTGENNS DGKTERKIVR RDNERQRRQL MAVLNSSLRS LLPCELIKGK  120
RSITEHMNEA VNYINHTKAK IEELNAKKEK IKKLYECDSK DFGLENESSG HDFLKYSIMV  180
RPTCLGAVEV VISSSCGEEE GLPLSGVLKV LLAEGLSVVG CASTRVNERF TRTGITRGKY  240
ILSRSFFMQR TASTMITKLE KEGLEVFIGV EQVKASRQGN HIAVKRLKTM SPKAEMEFAV  300
EVEILGRVRH RNLLGLRGFY AGGDERLIVY DFMPNHSLIT HLHGQLAADC LLDWSTRLSI  360
AIGSAEGLSY LHHEANPHII HRDIKASNVL LDSEFEAKVA DFGFAKLIPD GVTHLTTRVK  420
GTLGYLAPEY AMWGKVSESC DVYSFGILLL EIISGKKPIE KLPGGVKRDI VQWVTPYVQK  480
GAFNQIADPR LKGKFDKVQV KSTVLIAMKC TDNSPDNRPP MIEVVDWLKG GIGRRKKEIT  540
KVEDTEDDEG SEGYDESQP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3tl8_A4e-6427954362330BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3tl8_D4e-6427954362330BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3tl8_G4e-6427954362330BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3tl8_H4e-6427954362330BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3uim_A2e-6427954354322BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3ulz_A2e-6427954354322BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028954154.10.0PTI1-like tyrosine-protein kinase At3g15890
TrEMBLA0A498JH110.0A0A498JH11_MALDO; Uncharacterized protein
STRINGXP_008376494.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF710033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.18e-29bHLH family protein