 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000519909 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
Trihelix |
| Protein Properties |
Length: 242aa MW: 27732.4 Da PI: 8.3593 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000519909 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 29.1 | 2.6e-09 | 36 | 105 | 7 | 76 |
trihelix 7 vlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76
l L++ + +e + ++ + ++W+ +++++ g++r+ q + kw+ l ++yk ik++e k ++ +s
MDP0000519909 36 ELILVNEVAAVEADCLKALSSFQKWKIIAQNCFTLGVSRTLDQYRRKWDALFGEYKGIKQWEAKCRASDS 105
55666666677777777778889****************************************9644433 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MKPEQTPSQL DRSHRSSGNR XSTRSQVAPD WNPTDELILV NEVAAVEADC LKALSSFQKW 60
KIIAQNCFTL GVSRTLDQYR RKWDALFGEY KGIKQWEAKC RASDSYWVLG IERRKRNGLP 120
ENFDQELFSG IDKLVRVRGN QSDTDPDSDP EDEAEAEXEE LDSEPESKRR KRRSIPQKSC 180
PKENSFRSCK REKPRETHAQ EKPQETHAEE KPVGSGLKAI PTKSLAEERP QKSCVKEKTY 240
K*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G31270.1 | 9e-42 | sequence-specific DNA binding transcription factors |
