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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MDP0000461727 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
bHLH |
Protein Properties |
Length: 644aa MW: 72434.2 Da PI: 5.9341 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000461727 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 13.2 | 0.00016 | 462 | 491 | 20 | 54 |
HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksL 54
++ Lr+++P+ + ++Ka+iL +++Y+k+L
MDP0000461727 462 LFVLRSMVPSI-----TEVDKASILDDTIKYLKEL 491
6789*****96.....69***************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 644 aa
Download sequence Send
to blast |
MAQNHERVPE NLRKQFAVAV RSIKWSYAIF WSLSTTQQGV LEWGEGYYNG DIKTRKTVEG 60 VEIKTDKMGL QRNVQLRELY KSLLDGETEA EQQAKAPSAA LSPEDLTDAE WYYLLCMSFV 120 FNPGEGLPGR ALATGQTIWL CNAQHADSKV FSRSLLAKTV VCFPYLGGVI ELGVTELVME 180 DLNLIQHIKA SLLDFSKPDC CEKSCSAPHK ADDDSEQIAA KVXHDVVDTL YLENLYSPSE 240 EIKFHHRGIN DLHGNHEEVN IDSPYGCSNG CDHNHQTEDS MMLEGTNAAS QVQSWHFMDE 300 DFSIQDSMNS SDCISEAFVN QGKAHSSAKC KNANHVNLKE LQNFNDTKLS SLDLESVDEH 360 VHYKRTLSAL LASSTKLIEN PCFCDGDCKS SFMKWKKIVV GGCRPTVHQK ILKKILITVP 420 LMSGVRSPRA IGKENTEKNV FPNLQGDDTR REHDKMRESE NLFVLRSMVP SITEVDKASI 480 LDDTIKYLKE LGARAEEMES CMDTVEVIAR RKFLNRVEKT SINYDKTKMD SVKRSLLNKR 540 KACDIDETDP YLNRLFPGES LPLDVKVCVK EQEVLIEMRC PYREYILLDI MDAINNLYLD 600 AHSVQSSTLD GVLTLNLKSK FRGAAISPVG MIKQALWKIA GKC*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4rqw_A | 1e-13 | 25 | 196 | 24 | 195 | Transcription factor MYC3 |
4rqw_B | 1e-13 | 25 | 196 | 24 | 195 | Transcription factor MYC3 |
4rs9_A | 1e-13 | 25 | 196 | 24 | 195 | Transcription factor MYC3 |
4yz6_A | 1e-13 | 25 | 196 | 24 | 195 | Transcription factor MYC3 |
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