PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000429215
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family Dof
Protein Properties Length: 295aa    MW: 31466.5 Da    PI: 9.3639
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000429215genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.27.7e-382887261
         zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                   +++   cprC+s+ntkfCyynnyslsqPryfCkaCrryWt+GG+lrnvPvGgg+rk k++
  MDP0000429215 28 NQQPHGCPRCQSMNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVPVGGGCRKGKRA 87
                   578889**************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-202977IPR003851Zinc finger, Dof-type
PfamPF027015.0E-333086IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.5373286IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103470IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MQQQQQEGGE QKEQQNQDQR LKAAEQQNQQ PHGCPRCQSM NTKFCYYNNY SLSQPRYFCK  60
ACRRYWTQGG TLRNVPVGGG CRKGKRAKGG SSSASASRTV QPQPSQKEQD MQNNLGIGGG  120
SVGMSTANPS GGLAIHHQYY PGSSHGYLSS FAGLQSLSQS QPFNVGGGHD PASNMSLLQG  180
FNLSVPMVAL QPQQRQQFFQ VSGARSNSLL DQAALYPSEH DLWAPQSVVN RSSVNPSSSS  240
AAAASDSALW TMGHNNPITT TTTTTTTTTS SSGGGPSLNP KQWPDLPGSY GSPN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008371698.10.0dof zinc finger protein 1-like
TrEMBLA0A498IXK51e-106A0A498IXK5_MALDO; Uncharacterized protein
STRINGXP_008371698.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41453258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.35e-25Dof family protein