PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000313643
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 446aa    MW: 48226.4 Da    PI: 7.2376
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000313643genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.5e-10275323355
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  MDP0000313643 275 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 323
                    58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.2E-17270339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.81E-11270327No hitNo description
PROSITE profilePS5088815.485272322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16273340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-7275323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10278328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MGGHDSEDVG FQHRNDGSLN RPSSGMSTNP LPEKVSRMAM SSVSMFKPSN GADPFFGSGW  60
DPIVSLSQND NFGGPSGVSH GEFPNPPYPV AMENQGXSST SHLVQYPSDS SYVGMVPKLP  120
QCFGSGSFSE MVGSFGLSEC GQIANPGCXP NYNPNREGGT EKTSTIGAQS HDDRQISEEG  180
ALASSPNGKR RKRVSESNSA FSPNKNADGE LNKDMSGESS DYLKEQDEKK AKTEENAAAN  240
LRGKQMGKQT KENSQSGDPK DSYIHVRARR GQATNSHSLA ERVRREKISE RMRLLQELVP  300
GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEL NIDIERILTK DILNSRSGGG  360
AIFGFSPGIG SSHPYPPGMF PGNLPSMPTS APQFPSLPQV LVPRLCFRLK VCNRLAPVTQ  420
DEKSELLPGV CHASFILPKD SSSSTR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.235430.0fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028962650.10.0transcription factor bHLH74-like isoform X1
TrEMBLA0A498JCK60.0A0A498JCK6_MALDO; Uncharacterized protein
STRINGXP_008357997.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75853345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.14e-75bHLH family protein