PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000304669 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | bHLH | ||||||||
Protein Properties | Length: 1366aa MW: 149943 Da PI: 7.2313 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.1 | 4.8e-11 | 641 | 683 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L MDP0000304669 641 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 683 79*********************66......****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.40.50.720 | 1.9E-70 | 33 | 283 | IPR016040 | NAD(P)-binding domain |
SuperFamily | SSF51735 | 5.67E-66 | 37 | 281 | IPR016040 | NAD(P)-binding domain |
PRINTS | PR00081 | 2.0E-29 | 40 | 57 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
Pfam | PF13561 | 4.5E-54 | 45 | 281 | No hit | No description |
PRINTS | PR00081 | 2.0E-29 | 111 | 122 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00080 | 8.9E-6 | 111 | 122 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00081 | 2.0E-29 | 161 | 177 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00080 | 8.9E-6 | 167 | 175 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00081 | 2.0E-29 | 187 | 206 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00080 | 8.9E-6 | 187 | 206 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00081 | 2.0E-29 | 208 | 225 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00081 | 2.0E-29 | 251 | 271 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PROSITE profile | PS50888 | 15.682 | 634 | 683 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 6.15E-16 | 637 | 701 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.2E-14 | 640 | 689 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.1E-8 | 640 | 683 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.0E-15 | 641 | 696 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.93E-12 | 641 | 687 | No hit | No description |
CDD | cd04873 | 1.32E-5 | 753 | 794 | No hit | No description |
SuperFamily | SSF53633 | 4.58E-56 | 884 | 1102 | IPR001048 | Aspartate/glutamate/uridylate kinase |
TIGRFAMs | TIGR00657 | 5.3E-81 | 906 | 1236 | IPR001341 | Aspartate kinase domain |
Pfam | PF00696 | 4.1E-36 | 911 | 1089 | IPR001048 | Aspartate/glutamate/uridylate kinase |
Gene3D | G3DSA:3.40.1160.10 | 4.9E-53 | 911 | 1105 | IPR001048 | Aspartate/glutamate/uridylate kinase |
SuperFamily | SSF55021 | 7.55E-16 | 1109 | 1209 | No hit | No description |
CDD | cd04933 | 1.67E-42 | 1120 | 1199 | No hit | No description |
PROSITE profile | PS51671 | 9.147 | 1125 | 1205 | IPR002912 | ACT domain |
PROSITE profile | PS51671 | 7.564 | 1285 | 1365 | IPR002912 | ACT domain |
SuperFamily | SSF55021 | 2.85E-13 | 1297 | 1346 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008652 | Biological Process | cellular amino acid biosynthetic process | ||||
GO:0004072 | Molecular Function | aspartate kinase activity | ||||
GO:0016597 | Molecular Function | amino acid binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 1366 aa Download sequence Send to blast |
MIRSLTREFK LISCNAFLCK RARPFSTRGA AGHGRLQGKV AIITGSASGL GKATAHEFIR 60 HGAHVIVADS DSELGPQVAX ELGPAAHFVQ CDVAVESQIA EAVETAMARH GKLDIMYNNA 120 GITGPAFPPS IVDLNLEEFD RVIRVNVRGA VAGIKHAARV MIPAGSGSIL CTSSIAGLLG 180 GVGPHPYSIS KFTIPGLVKS LASELCRNGI RVNCISPSPI PTSMVVREIW KLYPGAPEDQ 240 VKEIVNGLGE LKGAKCEEID VAQAAVYLAS DEAKYVTGHN LTTFNKNNKK PDKRRKTVML 300 PMSSGAAWMG GDEDDAASWT RNSTTTHNNN XNEAEPRRND QDSSLGASFS NFKSMLEGDW 360 YMNNVLSNPA QDLHAFSSTQ ASETTLAPLQ PIDSSASCSP SPAFSLDPSQ PPQQFLPPKS 420 CFSSLLNVVC SNPFDNSFDL GCDAGFLGSF QGNQPSNSSV LMGFTALNSH AQMGTPELSS 480 SAEFPASRLL PVTDNANVLD GDFGFEGFDG SAGAQLLNRA KLLFPPMGAQ PTLFQKRRQN 540 SVGDGGDKLG NLEISGPRYG GLLESLEKKR KRNEEGEMEE GSLDVSGLNY DSDDFNEYSQ 600 XEVEENAKNG GSNSNANSTV TGVEGGDRKG KKKGLPAKNL MAERRRRKKL NDRLYMLRSV 660 VPKISKMDRA SILGDAIDYL KELLQRINDL HNELESAPPG SLLPASTSFH PLTPTPSTLP 720 CRVKEELCPS SLLSPKTQPK VEVRVREGRT VNIHMFCSRR PGLLLSTMRA LDNLDLDVQQ 780 AVISCFNGFA LDVFRAEYKL SPYVSTRTAP WETETILDST FGPXLLFLNR QPXIFCQRRP 840 PYEISVKFWW TQNLKIFAFQ STTFVTKSWF RNLCRFQQWI LCKCERLFXY EQGFETHLQE 900 LEQLLKGIAM MKELTLRTKD YLVSFGECMS TRLFVAYLNK IGVKARQYDA FEIGFITTDD 960 FTNADILEAT YPAVAKRLHG DWICDPAIPI VTGFLGKGWR SCAVTTLGRG GSDLTATTIG 1020 KALGLREIQV WKDVDGVLTC DPNICQHAQP VPYLTFEEAA ELAYFGAQVL HPQSMRPARE 1080 ADIPVRVKNS YNPNAPGTVI THARDMSKAV LTSIVLKRNV TMLDIVSTRM LGQYGFLAKV 1140 FTTFEDLGIS VDVVATSEVS ISLTLDPSKL WSRELIQQAS ELDHVAEELE KIAVVNLLQH 1200 RSIISLIGNV QRSSLILEXA FQVLRTIGVN VQMISQGASK GTAYIRLVSF LFHLLCQRVN 1260 LVHNFRTLWV ALVIHRKHAF QVLRTIGVNV QMISQGASKA FQVLRTIGVN VQMISQGASK 1320 VNISLVVNDD EAEQCVRALH QAFFGNDLFE VECGSENGSV LVSEQH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2cdq_A | 0.0 | 896 | 1351 | 117 | 491 | ASPARTOKINASE |
2cdq_B | 0.0 | 896 | 1351 | 117 | 491 | ASPARTOKINASE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 630 | 648 | KKKGLPAKNLMAERRRRKK |
2 | 642 | 649 | ERRRRKKL |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.15409 | 0.0 | bud| leaf |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A498HE06 | 0.0 | A0A498HE06_MALDO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2414 | 34 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.4 | 1e-121 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000304669 |