PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000301871
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 589aa    MW: 66407.9 Da    PI: 9.0326
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000301871genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.24.4e-06379428154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    +r  + erEr+ R+  N+ f+eL + l  +    ++   Ka+iL +A++ +k+L
  MDP0000301871 379 KRIHKAERERKKREXFNEHFFELADALELN----QQNSGKASILSEATRLLKDL 428
                    688899**********************98....56677899******999987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.73E-6376428No hitNo description
Gene3DG3DSA:4.10.280.106.6E-8377447IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.96378428IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-11379457IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.6E-4384434IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    Send to blast
MHRSKTVVFI WFLYALLFYS LFQMALRNSD SSRNSTSASD SVISNKERRS ALYDQMGRDL  60
AEHGPVFLKN GGQTSQSLSL SDIFTIRDGS VAPVLKAANP PVRAXVLYLS TQYSIPILNX  120
LKPILDPYFD EAIWFQNSSL YHSSMFHASH HISPVPATXD EIEAEAAAVR NIAEGLCPLK  180
IVLDRVVLTS TGVLLGCWQV XSGSDPITIR EKLRTALPRA PEKQLVLSNT SEQVHFFQEL  240
VNRLNKELQG FEDFSQSQLS SRQLVTIDQR YKALSSSSRR SWVPXILCRX LARVXLQRRH  300
QCVESFGIYV KGRMHMVGRL ALSRSVHLGS IVNKYLTPMD KADXFRIDDC TNRCYYYPMP  360
KSICVKACXG IKKQGKIPKR IHKAERERKK REXFNEHFFE LADALELNQQ NSGKASILSE  420
ATRLLKDLFG QIKCLQKENA SLLSESNYMT LEKNELRDDN SALETQIEKL QSEIQERVAQ  480
SKPDLNAPPC TELRPEVASH FTGNCIGFPT QEPGLQQPPA VFVMPVGPDL QAYPQPXVAH  540
LTSNTTSHVS KPXARYPTSV DSWPSQLLGE KPTAGKGFRQ SRENDHSIM
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.71620.0bud| cell culture| fruit| leaf| root| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLW9QXK21e-169W9QXK2_9ROSA; Uncharacterized protein
STRINGXP_010092057.11e-170(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF973833
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.37e-52bHLH family protein