 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000295812 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
WRKY |
| Protein Properties |
Length: 404aa MW: 45112.1 Da PI: 10.2783 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000295812 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 32.7 | 1.5e-10 | 260 | 279 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS
WRKY 3 DgynWrKYGqKevkgsefpr 22
D y+WrKYGqK++kgs++pr
MDP0000295812 260 DDYSWRKYGQKPIKGSPHPR 279
99*****************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 404 aa
Download sequence Send
to blast |
MAVDFMGYRN TXSSSSFSAK LEENAVQEAA SGLESVEKLI RLLSQAQQNQ HQEKYPSTAM 60
DMDCRAVADV AVSKFKKVIS LLGRTRTGHA RFRRAPLTVN SGSSFQPQYQ SHSQDIVVKQ 120
APLESTKVYH ATPIQQIPPS HHHHHSMVLE STMDSSNTMN FSYSAATSFM SSLTGDSDSK 180
QPMSSSAFQI TNLSQVSSAG KPPLSSTSLK RKCSSENLGS GKCGAGSSGR CHCSKKRKLR 240
QKRVVRVPAI SLKMADIPPD DYSWRKYGQK PIKGSPHPRI ELRFSGFCSW DRRACPPEEE 300
KNEEEDPVED KSKRKTRWTX RRGRPGGQTR KTKLDSXFCX IRRLWTPNLG LDVLDFLMCE 360
AVRKKEMRAA IYEDAAVVLG WSGEVVEQGE QSSKALRSRA KQRS
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ598139 | 0.0 | FJ598139.1 Malus hupehensis WRKY transcription factor mRNA, complete cds. |
