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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000290263 |
Common Name | PIF3 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
bHLH |
Protein Properties |
Length: 708aa MW: 75818.8 Da PI: 6.1753 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000290263 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 50.7 | 3.2e-16 | 454 | 500 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq
MDP0000290263 454 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 500
6*************************8.....6******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009704 | Biological Process | de-etiolation |
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
GO:0010017 | Biological Process | red or far-red light signaling pathway |
GO:0031539 | Biological Process | positive regulation of anthocyanin metabolic process |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 708 aa
Download sequence Send
to blast |
MPLSELYRMA GRVDSNQDFE NDFLELVWEN GQVMMQGQSS RTRKNPSFNN PKNRDRDVGN 60 GNIGKTGKFG SVLDSGLDEI PLSVPSSEMG LSEDDDMLPW LNYSIDEPLH HEXCHDFLPE 120 FSSATANEAS TNHNLASIDK RSSSSQVFRD SNSNSAHEGA CLQQXNVGKV PLNGGADASR 180 PRSGATQLYS LSSQRSQASF PSFRSRVSDT AGDNTSSATH RGVGKNSTQI SSAGGSPXMK 240 ILRPDPVTPS NNNPSIVNFS HFSRPAALVK ANVQTNGVMA GSGSSSMIRI ANKDKFSAAT 300 XNNLPESMPI DSSSSAXKES NSQCQQILVR SSVELKPTEA KPLEEPCTAK QSEGTCQEET 360 SKDDINSNHI PCESAVRVSP NGEKTVEPVV ASSVCSGNSV ERGSDDPTQA LKRKFRETDE 420 SECHSDDVEE EYMGVKKGDH ARGMGSKRSR AAEVHNLSER RRRDRINEKM RALQELIPNC 480 NKVDKASMLD EAIEYLKTLQ LQVQMMSMGA GMYMPPMMLP PGMQHMHGPC MAHFSPMGVG 540 MGMGMGLGMG FGMGMPDMNG ASSSYPMLQV PPMQGAHFPG SHMAGHTAFN GMMGSNLQMF 600 GLPSQGVPVP MQRAPLAPSS AGPFVKSSAG LNAGSSGGPV ENVESAPVSG SKDSVQNMNS 660 QAMQNSNANS SMNQTSSQGQ ATNEGFGQSA LVRNNVQVTD VNNXRANG
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JN987874 | 0.0 | JN987874.1 Malus x domestica phytochrome-interacting factor 3 (PIF3) mRNA, complete cds. |