PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000289955 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | NAC | ||||||||
Protein Properties | Length: 752aa MW: 84743.7 Da PI: 4.8756 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.1 | 1.5e-18 | 25 | 158 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkat 86 +p GfrFhPtd+el+ ++L + v ++ ++ ++ i e+d++ k+ Pw + e++++yfF++ +++++ r +r + + g+W+++ MDP0000289955 25 MPLGFRFHPTDQELIXFFLYNXVLXREplmadCNNFNLIYEFDLFgKTPPWVVWEnfgGXGLEDQDLYFFCQLKTRSQ--ARIKReIDAGGTWSES 118 699********************999988877566678****9873678899864234334488999*****988764..68888456689***88 PP NAM 87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ v++ +++ g k+ L + k + + dW+++ey++ MDP0000289955 119 NSK-LVKDLxNEKXXGKKRNLRYEK--EGCEHDGDWLLEEYSI 158 764.3333348999********984..4444589*******85 PP | |||||||
2 | NAM | 26.1 | 2.3e-08 | 493 | 544 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLp 48 +ppGfrF Ptd+elv +yL ++v + k + ++++ +d ++ePw + MDP0000289955 493 VPPGFRFLPTDQELVGFYLSNRVVAGKkfmAYCRSFMHXFDpFGEMEPWVIW 544 69******************99766554643334468888735578999774 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.09E-19 | 17 | 183 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 24.746 | 25 | 184 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-14 | 26 | 158 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.75E-11 | 490 | 605 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 7.209 | 493 | 641 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-6 | 494 | 579 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 752 aa Download sequence Send to blast |
MEAEXYGGXV PLGFYENPLL GSNGMPLGFR FHPTDQELIX FFLYNXVLXR EPLMADCNNF 60 NLIYEFDLFG KTPPWVVWEN FGGXGLEDQD LYFFCQLKTR SQARIKREID AGGTWSESNS 120 KLVKDLXNEK XXGKKRNLRY EKEGCEHDGD WLLEEYSILP SVVAGADDSD HEIGKVVLCR 180 LKKNSRSGNK KNXSNSTQQV NEQPAKKRAR KEVKEKPAKK KARKEVKQKP AKKKARNEVG 240 SQNTTSVITH TVEELQNCPS TSSAPVVPFD ESNYKMISDA INHDQQCISN IDGSTMPASF 300 SDHDYVPVSF ASEGGXSLLK XEDLLFENGE DMFFDLDDLL PPLDXGSXWS LXKLPQIDGT 360 QVPLPLDGMS FWNDSFKDVP VIRPPSRLRQ SMLLHHGTSV PASFKDIRTH LSLHHATHIG 420 DPNYSDXYLV GFYPTRFRTS TLLLXTLGXN DGSALVNARE NESNLQESKS RALVNLTMEN 480 FYGNTLMGSY GXVPPGFRFL PTDQELVGFY LSNRVVAGKK FMAYCRSFMH XFDPFGEMEP 540 WVIWENFGGR SLVDQDLCFK YKNEGCDQDG GWLLEEYSLR QTQEIVDGNG SDHKXRXVVL 600 CRLKKNPRCA NMXDHPTREL KEKPENERAR KSSSLVHXDE SNKKISGTNQ DQECKSGIDL 660 NAMPPDFSDH DCPTTTSGVC SCPICLDGGG GESLLEDEDF LLDDEDLLKG VDLSLGPPVQ 720 PQFEETQVVP RPASTGFEDX LTADESYFVN DR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008385056.2 | 0.0 | NAC domain-containing protein 83-like | ||||
TrEMBL | A0A498IRZ7 | 0.0 | A0A498IRZ7_MALDO; Uncharacterized protein | ||||
STRING | XP_008385056.1 | 0.0 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12591 | 6 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 7e-11 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000289955 |