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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000287039 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
GRAS |
Protein Properties |
Length: 410aa MW: 47214.6 Da PI: 7.6561 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000287039 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 339.9 | 4.4e-104 | 71 | 407 | 34 | 373 |
GRAS 34 dgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLl 129
pm +la+yf+ +L+arla+ ++ +y+ l ++ts ++e l+ ++++ sP+ +s+++aN++I++ e+++r+HiiDf+is+G+QWp+++
MDP0000287039 71 FNHPMLKLAHYFADGLEARLAGATTPTYSFLVGTQTS---TAEILKGYQVYISSSPFKLMSNFMANRTIMKLSENATRLHIIDFGISYGFQWPCFI 163
4589***************************999999...89****************************************************** PP
GRAS 130 qaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvslese 223
q L++R++gpp+lRiT+++ p++g +e++eet++rL+k+Ae+++vpfe nv +a+++e++++e+L++++ E ++Vn++ +l++++de+v +s+
MDP0000287039 164 QHLSERTGGPPKLRITAIELPQPGfrPTERVEETARRLKKYAERFNVPFECNV-IAQKWETIKFEDLKIDRSELTVVNCMCRLKHIPDETVMASSP 258
***********************9****************************9.7***************************************** PP
GRAS 224 rdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
rd vLkl+k+++P+v+++ + +n++ F++rf eal++ysa+fd +ea++pre+e r+ E+++ gr+ivnvvaceg er+er et+++W+ r
MDP0000287039 259 RDIVLKLIKKINPDVFIHGVVNGTYNAPFFATRFREALYHYSAFFDIFEATVPREDEMRQLFEKAIHGRDIVNVVACEGLERVERPETYKQWQVRX 354
************************************************************************************************ PP
GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+aGFk++pl++ k +k++l+ +++d +r++e+ +++++ W++r+++++S W
MDP0000287039 355 VRAGFKQLPLDQALLKRVKRMLKSYHDD-FRIDEDGNWMLQSWRGRTVLALSIW 407
**************************66.************************* PP
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Sequence ? help Back to Top |
Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MDTLLERYDV SMERFNFGSV YPHQNLVNGF KVNHESTNSI FPPTNLDHNS SDSSPYSSAG 60 SDGDSIDPND FNHPMLKLAH YFADGLEARL AGATTPTYSF LVGTQTSTAE ILKGYQVYIS 120 SSPFKLMSNF MANRTIMKLS ENATRLHIID FGISYGFQWP CFIQHLSERT GGPPKLRITA 180 IELPQPGFRP TERVEETARR LKKYAERFNV PFECNVIAQK WETIKFEDLK IDRSELTVVN 240 CMCRLKHIPD ETVMASSPRD IVLKLIKKIN PDVFIHGVVN GTYNAPFFAT RFREALYHYS 300 AFFDIFEATV PREDEMRQLF EKAIHGRDIV NVVACEGLER VERPETYKQW QVRXVRAGFK 360 QLPLDQALLK RVKRMLKSYH DDFRIDEDGN WMLQSWRGRT VLALSIWVPA
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |