PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000283975 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | NAC | ||||||||
Protein Properties | Length: 1201aa MW: 135889 Da PI: 7.6803 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 63.7 | 5.6e-20 | 866 | 992 | 1 | 116 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........t 78 lp+G++F+P+d el+ +L++k+ + + +e+i++++ i++ +P++Lp + +++ ++++fF+k+ k+yatg+rk+r+ MDP0000283975 866 LPVGVKFDPSDGELL-VHLAAKCGVGNsqphllI--DEFIPTLEgdngICYDHPKNLPGA-TKDGSSIHFFHKTMKAYATGQRKRRKvdsqrsvaS 957 799************.678888765554566432..334554423345**********44.4567899******************8688887776 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkg 116 ++ +W++tgk+k++++ + + g kk++ g +++ MDP0000283975 958 EDVRWHKTGKTKAIME--NGVXGWKKIMYHL-GAEEDE 992 6999***********9..6689****99776.444443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50181 | 9.815 | 3 | 50 | IPR001810 | F-box domain |
Pfam | PF00646 | 4.8E-6 | 9 | 47 | IPR001810 | F-box domain |
SuperFamily | SSF81383 | 1.7E-11 | 9 | 62 | IPR001810 | F-box domain |
SMART | SM00256 | 1.9E-6 | 9 | 49 | IPR001810 | F-box domain |
Gene3D | G3DSA:1.20.1280.50 | 3.6E-8 | 9 | 45 | No hit | No description |
TIGRFAMs | TIGR01640 | 2.4E-17 | 98 | 363 | IPR017451 | F-box associated interaction domain |
Gene3D | G3DSA:3.30.200.20 | 3.6E-21 | 454 | 533 | No hit | No description |
SuperFamily | SSF56112 | 4.72E-62 | 459 | 694 | IPR011009 | Protein kinase-like domain |
SMART | SM00220 | 6.4E-45 | 468 | 769 | IPR000719 | Protein kinase domain |
PROSITE profile | PS50011 | 37.502 | 468 | 735 | IPR000719 | Protein kinase domain |
Pfam | PF00069 | 8.1E-46 | 473 | 690 | IPR000719 | Protein kinase domain |
PROSITE pattern | PS00107 | 0 | 474 | 495 | IPR017441 | Protein kinase, ATP binding site |
CDD | cd13999 | 3.95E-81 | 474 | 692 | No hit | No description |
Gene3D | G3DSA:1.10.510.10 | 1.4E-43 | 534 | 710 | No hit | No description |
PROSITE pattern | PS00108 | 0 | 588 | 600 | IPR008271 | Serine/threonine-protein kinase, active site |
SuperFamily | SSF101941 | 6.28E-22 | 851 | 1005 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 16.734 | 866 | 1024 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.7E-5 | 867 | 986 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1201 aa Download sequence Send to blast |
MRAAKYKCIP SGVLADILFR LPVKSLKRFE CVCKSWYDLI KDPSFXIQHL HHSKXVNQHX 60 LLXKGIRNSH XSLLCXDEIS LLSRHRLXLP SVFSEILGPC NGIYCFIRLN VEFELDLIAL 120 ANVSLREFXV VPDLSISHPH SQSQSVKLCG FGFDRKTNDY KLVLILSYAD RATGXEFDCK 180 EVVYSLRSKS WRELDXTFPY AEVTHWLSPF CKISYWPFLL TSDSGTYVNG NSHWLVSDTT 240 HWLANDDIRY TIRYFDMVDE VFRRISLPKL PEFSSYGDMY VXINALYTDS LSVVVRPKSY 300 IPDKTCEVWI MHDYGDDESW TKLXTXGPXE GIARSLKLLG FWQKGEFLFE YDEEQVISYN 360 PNTQKITQKF RICGSLRAYT ESLVSIVGDQ RDDQNLLFDI VKEEIRXVGC RXLDXLSLLF 420 YLALDCHRKI NLQMQKFQRE KTMGSGNGVY SVGDFDLDAK WLIDPKQLFV GPRIGEGAHA 480 KVYEGKYKNQ NVAVKIVPRG ETPEEIAKRE ARFAREVAMM SKVXHKNLVK FIGACKEPVM 540 VIVTELLLGG TLRKYLFSMR PRCLDTHVAV GFALDIARAM ECLHSHGIIH RDLKPENLIL 600 TADHKTVKLA DFGLAREESL TEMMTAETGT YRWMAPELYS TVTLRHGEKK HYNHKVDAYS 660 FAIVLWELIH NKLPFEGMSN LQAAYAAAFK MLLHYLSTIS XPAPAIPQRM FKSENAVLPP 720 ESPGTSSLMA THNSGETXKT NTDMEDKTKA ARAGYCLVLA AQDNQSHQTG RRXAITGNCR 780 APTKARXDXF VLSEXQPRTQ FRQPPGPTEK ASRRAWLINS RGLASKVKNA ARSTACPIKE 840 CGANRECPNC HFVIDNSDVL SEWPGLPVGV KFDPSDGELL VHLAAKCGVG NSQPHLLIDE 900 FIPTLEGDNG ICYDHPKNLP GATKDGSSIH FFHKTMKAYA TGQRKRRKVD SQRSVASEDV 960 RWHKTGKTKA IMENGVXGWK KIMYHLGAEE DEREGEYVVS KIFYQQHKQS ERNDNNVVXE 1020 DNDVNALRTS PRTPVPNPPI PPRPGKSVCF EDVPDEAMLR SSVKPTWLAG ESQADDLHSL 1080 DETLLCKEIF GSAXNLISNT DFNNNTYEVN GNSSTSXGXX DLENIGLDSP PDFQLPVKLT 1140 MKELPGMTLN SQICAIVESI RMASFSACSS RATRQLQCFR IRMEFPLALC NFSEHMKCVG 1200 M |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4fk3_A | 1e-32 | 443 | 680 | 1 | 230 | Serine/threonine-protein kinase B-raf |
4fk3_B | 1e-32 | 443 | 680 | 1 | 230 | Serine/threonine-protein kinase B-raf |
4r5y_A | 1e-32 | 443 | 680 | 1 | 230 | Serine/threonine-protein kinase B-raf |
4r5y_B | 1e-32 | 443 | 680 | 1 | 230 | Serine/threonine-protein kinase B-raf |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01600.1 | 1e-69 | NAC domain containing protein 44 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000283975 |