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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000281698 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 326aa MW: 36353.2 Da PI: 4.4642 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000281698 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.1 | 1.8e-19 | 82 | 136 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
k++++t++q++ Le+ Fe+++++ e++ +LAk+lgL+ rqV +WFqNrRa++k+
MDP0000281698 82 KKRRLTANQVQFLEKNFESENKLEPERKVQLAKELGLQPRQVAIWFQNRRARYKN 136
56689************************************************95 PP
|
| 2 | HD-ZIP_I/II | 127.8 | 4.6e-41 | 82 | 172 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
kkrrl+++qv++LE++Fe+e+kLeperKv+la+eLglqprqva+WFqnrRAR+k+kqlEkdy++Lk++y +lk + ++L ke+ +L++e++
MDP0000281698 82 KKRRLTANQVQFLEKNFESENKLEPERKVQLAKELGLQPRQVAIWFQNRRARYKNKQLEKDYDSLKASYGKLKVDADNLLKENGSLKNEID 172
9**************************************************************************************9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MGSMKTINKA KADIEDTAAA GEFAPVEPLR VGRKTESVVA SNSMVNFGNV SGGDSLDRPF 60
FQPKEENEDE DYDGSYLHQP GKKRRLTANQ VQFLEKNFES ENKLEPERKV QLAKELGLQP 120
RQVAIWFQNR RARYKNKQLE KDYDSLKASY GKLKVDADNL LKENGSLKNE IDSIKDILLS 180
REKGKPGKGN SDSQDAINTS DLEPRNAILN AGSENVTKVA MVVCKQEDAS SAKSDVFDSD 240
SPHCTENHSS LLEPADSSHV FEPADQSDFS QDEDDDLGKT LLPPPPPNLL KLEDCCYDDL 300
PPPSSSNFGY IPLDDQDQQP FCFWPY
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 129 | 137 | RRARYKNKQ |
