PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000280559
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 580aa    MW: 63173.7 Da    PI: 7.4094
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000280559genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.9e-10410468563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    kr++r   NR +A rs +RK  +i+eLe kv++L++e ++L  +  +l+  +  l+se+
  MDP0000280559 410 KRAKRILANRQSAARSKERKMRYIQELEHKVQTLQTEATTLSAQFTKLQRDSVGLTSEN 468
                    9*****************************************99999998887777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-16406470IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909408471IPR004827Basic-leucine zipper domain
PfamPF001701.0E-8410468IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.63E-11410461No hitNo description
Gene3DG3DSA:1.20.5.1708.9E-11410461No hitNo description
CDDcd147032.26E-21411460No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MEGSDDTGSG SGSGSAKQQR PNPTFGSSSF SIPKPNSNLD IPNFNPSSQM GLPMRQSSPS  60
LSPENSKRPG IPPSHPNNHN SMPFSNVMRP QSRSWQLGTQ NLSPGSSHTR SLSQPPVFSL  120
DSLPPLSPLT YRDPSGPSPS DPNSVEVSME ETVNSQGPSL RSPVADSSAF WAGDGLPPRR  180
RHRRSNSDVP LGFSAIIQSS PQLIPIGRQT SLDGSASGRD NSGIGKPNQL MKQGSNGNAE  240
GMDERKSGGE IADDLFNAYM NLENIDKMNS SGNEDKDLDS RASGSKTNGC ESSDNEVESG  300
LKGNGNGRQR PGSGFPNERR EGLKRTAGGD VVSNVRHCRS ISMDSYMESL NFDDEPLKPL  360
PLGQQSPSTS LDGNSAKFSM EFGSGEFNAI ELKKIMENEK LAEIALSDPK RAKRILANRQ  420
SAARSKERKM RYIQELEHKV QTLQTEATTL SAQFTKLQRD SVGLTSENNE LKFRLQALEQ  480
QAQLKDALNE ALTGEVQRLK LAAGELGGGE GHLSNRMAQQ LSMNQQMLQL QHLNLYQMQQ  540
QPQHQAQQNT QPQQFMQQPQ QNRPPHHQNG NAAAKPELSQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008387966.10.0uncharacterized protein LOC103450404
TrEMBLA0A498HRB80.0A0A498HRB8_MALDO; Uncharacterized protein
STRINGXP_008387966.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-116bZIP family protein