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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000274300 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
Family |
MYB |
Protein Properties |
Length: 351aa MW: 39635.5 Da PI: 6.5077 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000274300 | genome | GDR | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57.3 | 3.6e-18 | 40 | 87 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT eEd+ l ++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
MDP0000274300 40 RGPWTVEEDLALMNYIANHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 87
89********************************************97 PP
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2 | Myb_DNA-binding | 49.9 | 7.3e-16 | 93 | 136 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ + eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
MDP0000274300 93 RGNISLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 136
78899*****************.*********.***********96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MAKGTRGCNS PSSQVSAEIL NETGSHDHEE AEDQMMDLRR GPWTVEEDLA LMNYIANHGE 60 GRWNSLARCA GLKRTGKSCR LRWLNYLRPD VRRGNISLEE QLLILELHSR WGNRWSKIAQ 120 HLPGRTDNEI KNYWRTRVQK HAKQLKCDVN SKQFKDTMRY LWMPRLVERI QAAAATSTAT 180 NATATNSSIA APATTHHFNN NINNNFQSSA QMLLQPSHHH FGVSSHSQLT PSYSTPENSS 240 TAASSDSFGT QVSPVSDLTD YYTPTTAATA ISVNNNPTPD NSYFVQANHQ VGTYDNYSGY 300 FSNQGFGLEH FQNMDEQNNN DQWGTVDSGD ISDNLWNVED MWFLQQQLSN I
|
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed specifically in flowers. Restricted to anthers in maturing flowers. Strongest expression in the vascular and connective tissue where the anther attaches to the filament. Not detected in pollen. {ECO:0000269|PubMed:19091873}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor contributing to the regulation of stamen maturation and male fertility in response to jasmonate signaling. Required for correct timing of anther dehiscence. Acts as a negative regulator of abscisic acid-induced cell death. Not involved in the regulation of BOI. Regulated by MYB21 and at a lower level by MYB24. Negatively regulated by the proteasome in an SCF(COI1) E3 ubiquitin-protein ligase complex-dependent manner. {ECO:0000269|PubMed:14555693, ECO:0000269|PubMed:19091873, ECO:0000269|PubMed:20921156, ECO:0000269|PubMed:23952703}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by jasmonate and pathogen infection. {ECO:0000269|PubMed:14555693, ECO:0000269|PubMed:19091873}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FR828540 | 1e-144 | FR828540.1 Rosa rugosa mRNA for putative MYB transcription factor (myb7 gene). |