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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000263981 | ||||||||
Common Name | BHLH15 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 27154.6 Da PI: 6.9162 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.6 | 0.00026 | 36 | 85 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r + erErr R++ N+ f L + l + + Ka+i +A++ +k+L MDP0000263981 36 KRIRKAERERRKREQFNELFLGLADALELN----EQNSGKASIISEATRLLKDL 85 577889*********************997....45566777888888877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 6.1E-7 | 33 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 11.23 | 35 | 85 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.2E-11 | 35 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MGSPDPXPAA XEGNVATEAS VXRACPGIKK QGKIPKRIRK AERERRKREQ FNELFLGLAD 60 ALELNEQNSG KASIISEATR LLKDLCGQIE CLQKENASLL SESNYMTLEK NELRDDNSAL 120 ETQIEKLQSE IQERVAQSKP NLNAPPRGEL RPEVPSHFTG NCISLPTQEP SLQQAPAVFV 180 MPFCPDLQAY PLPDATHXTS NTTSHVSKPH ARYPTSVDSW PFQLLGEKTT AGKGFRQSGK 240 SDPSNM |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.6554 | 0.0 | fruit| leaf |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001280891.1 | 1e-179 | transcription factor bHLH47 | ||||
Swissprot | Q9SN74 | 2e-59 | BH047_ARATH; Transcription factor bHLH47 | ||||
TrEMBL | A0A498I1U9 | 1e-174 | A0A498I1U9_MALDO; Uncharacterized protein | ||||
TrEMBL | D9ZIN9 | 1e-177 | D9ZIN9_MALDO; BHLH domain class transcription factor | ||||
STRING | XP_008360843.1 | 1e-164 | (Malus domestica) | ||||
STRING | XP_008393145.1 | 1e-164 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF8223 | 25 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.3 | 6e-51 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000263981 |
Entrez Gene | 103455342 |