PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000261293
Common NameBHLH21
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 305aa    MW: 33683.4 Da    PI: 5.6642
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000261293genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.34.3e-164594255
                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  MDP0000261293 45 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 94
                   899*************************9....8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-1841115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.1E-2342115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.0444393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.98E-144598No hitNo description
PfamPF000102.0E-134594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.0E-124999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MRTAAKGNQE EDEYDXEEFG SRKEGPSSNS NSKDAKNNDK ASAIRSKHSV TEQRRRSKIN  60
ERFQILRDLI PHSDQKRDTA SFLLEVIEYV QYLQEKVHKY EGSYQGWSPE PTKLMPWRNS  120
HWRVQSFVGN PQAIKSDAAP MLXFPGKFDE SNISINPNML ANSTPNPVES DPSRDVASKI  180
VDRQPEIGQI SDAQSTQCPT TSASDVLSQQ EELTIEGGTI SISSVYSQGL LNSLSQALQS  240
AGVDLSQASI SVQIDLGNRA NRGLPSVTPA SKDNDNPHSS NQTTAHFRDA GSGEDSDQAH  300
KRLKT
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.9620.0fruit
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Functional Description ? help Back to Top
Source Description
UniProtPositive brassinosteroid-signaling protein.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00219DAPTransfer from AT1G69010Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001280774.10.0transcription factor BIM2-like
SwissprotQ9CAA41e-113BIM2_ARATH; Transcription factor BIM2
TrEMBLD9ZIP30.0D9ZIP3_MALDO; BHLH domain class transcription factor
STRINGXP_008339753.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17303382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-95BES1-interacting Myc-like protein 2
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]