PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000261293 | ||||||||
Common Name | BHLH21 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | bHLH | ||||||||
Protein Properties | Length: 305aa MW: 33683.4 Da PI: 5.6642 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.3 | 4.3e-16 | 45 | 94 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + a+ L +++eY+++Lq MDP0000261293 45 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 94 899*************************9....8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.7E-18 | 41 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.1E-23 | 42 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.044 | 43 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.98E-14 | 45 | 98 | No hit | No description |
Pfam | PF00010 | 2.0E-13 | 45 | 94 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.0E-12 | 49 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MRTAAKGNQE EDEYDXEEFG SRKEGPSSNS NSKDAKNNDK ASAIRSKHSV TEQRRRSKIN 60 ERFQILRDLI PHSDQKRDTA SFLLEVIEYV QYLQEKVHKY EGSYQGWSPE PTKLMPWRNS 120 HWRVQSFVGN PQAIKSDAAP MLXFPGKFDE SNISINPNML ANSTPNPVES DPSRDVASKI 180 VDRQPEIGQI SDAQSTQCPT TSASDVLSQQ EELTIEGGTI SISSVYSQGL LNSLSQALQS 240 AGVDLSQASI SVQIDLGNRA NRGLPSVTPA SKDNDNPHSS NQTTAHFRDA GSGEDSDQAH 300 KRLKT |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.962 | 0.0 | fruit |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive brassinosteroid-signaling protein. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00219 | DAP | Transfer from AT1G69010 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001280774.1 | 0.0 | transcription factor BIM2-like | ||||
Swissprot | Q9CAA4 | 1e-113 | BIM2_ARATH; Transcription factor BIM2 | ||||
TrEMBL | D9ZIP3 | 0.0 | D9ZIP3_MALDO; BHLH domain class transcription factor | ||||
STRING | XP_008339753.1 | 0.0 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1730 | 33 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 3e-95 | BES1-interacting Myc-like protein 2 |
Link Out ? help Back to Top | |
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Phytozome | MDP0000261293 |
Entrez Gene | 103402774 |
Publications ? help Back to Top | |||
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