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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000256486 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
GRAS |
Protein Properties |
Length: 604aa MW: 66498 Da PI: 4.9391 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000256486 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 357.9 | 1.6e-109 | 235 | 604 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97
++Ll+cA+ ++++d a + L rl+e s +gdp+qR+a+yf+eAL++r++ l + + ++++++ ++ + ++k++++++P+ kf+hlt
MDP0000256486 235 LKALLDCAR-LAESDPDGAVKSLVRLRESISDHGDPTQRVAFYFAEALQNRVSF----LQSEKSFTTAHDTPCEDFTLSYKALNDACPYSKFAHLT 325
689******.5666999***********************************98....44444455555555999********************* PP
GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
aNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p s+Ri g+ +p+ g + +l +tg+rL++fA l+++fef++ + + +++l+
MDP0000256486 326 ANQAILEATERATKLHIVDFGIVQGVQWAALLQALATRSTGKPvSIRISGIPAPSLGdsPAASLIATGNRLREFAXLLELNFEFEP-ILTPVHQLD 420
***************************************77777**********999889999***********************.799****** PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
+ rv+p+EalaVnlvlql++llde+ + + + Lkl ksl+P++v++ e ea++n+ F+ rf +al+yy+alf+sle ++ r+s er kvE
MDP0000256486 421 ESCVRVDPDEALAVNLVLQLYNLLDEKPTAVQ---SALKLAKSLNPQIVTLGEYEANLNRVGFASRFKNALKYYAALFESLEPNMIRDSPERLKVE 513
************************99999988...9************************************************************ PP
GRAS 287 rellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
r llgr+i ++v e+ +rer e +e+W+ +e +GF+pv+ls + ++qak ll +++ s y++ e+ ++ l W++ pL++vS+Wr
MDP0000256486 514 RLLLGRRIGSLVGPEQPGtKRERFEDKEQWKYLMECSGFEPVALSXYSVSQAKILLWNYNySSLYSLSESPPGFLsLSWNEVPLFTVSSWR 604
**************998769****************************************9999****99877777**************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 604 aa
Download sequence Send
to blast |
MAYMCADSGN LMAIAQQVIQ QKQQQEQQQQ QRHHHHQPPL GAFSLTPWPN NNHHTPTQSP 60 NLGFGLTGSG FSDPFQLPGS SDAGGEPGFP FPNLDHHSAG FRFSDLGGGG PAEFDSDEWM 120 DSIIGGGDST DSSNLPSACD TWQGSNSDFG LYGADPFRPH CPSRLSNPCS PPSDLNRVIF 180 SETQNQLPAW TSPLPQQLHQ VSVKESKSTD PQSLQNDAVG VSLRSPEIES EPPLLKALLD 240 CARLAESDPD GAVKSLVRLR ESISDHGDPT QRVAFYFAEA LQNRVSFLQS EKSFTTAHDT 300 PCEDFTLSYK ALNDACPYSK FAHLTANQAI LEATERATKL HIVDFGIVQG VQWAALLQAL 360 ATRSTGKPVS IRISGIPAPS LGDSPAASLI ATGNRLREFA XLLELNFEFE PILTPVHQLD 420 ESCVRVDPDE ALAVNLVLQL YNLLDEKPTA VQSALKLAKS LNPQIVTLGE YEANLNRVGF 480 ASRFKNALKY YAALFESLEP NMIRDSPERL KVERLLLGRR IGSLVGPEQP GTKRERFEDK 540 EQWKYLMECS GFEPVALSXY SVSQAKILLW NYNYSSLYSL SESPPGFLSL SWNEVPLFTV 600 SSWR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |