PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

MDP0000252038

Organism

Malus domestica

Taxonomic ID

3750

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus

Family

Dof

Protein Properties

Length: 328aa MW: 36864.4 Da PI: 10.8075

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MDP0000252038	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	38.1	3.3e-12	269	314	3	48
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrn 48 +k+l+cprC+s nt+f + +l + + +C+ C+r W GG lr MDP0000252038 269 KKILPCPRCESLNTRFEQFKYSNLRKEKRLCRDCKRSWIVGGKLRR 314 68899***************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.3E-11	270	314	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-7	272	314	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MASSLLHVLV ILLGFSQLIF LNAIPATRIG SLKLGPQLHQ IAGSNKLVLL HIFDIIVLRD 60 SRGSSRDLNR HVTTEKIYNE RAISERMGVE LNDYPGSGAN NRHTPKPVTK SIALVRKLAG 120 QVLISLPPAL LKLGASLYVL SWQFAAIEFV AENKSRAARI LRTCSNFWKT GRILCDIFDR 180 LCFCSSITLA FSGFFLIHFA SKCVGNLVEL ERIKEGNKVL VRDRDMQRRV AEKKPEIQKK 240 DMRVEACISK PALQPSADEL ARAKAEARKK ILPCPRCESL NTRFEQFKYS NLRKEKRLCR 300 DCKRSWIVGG KLRRGGVNNS LKLGLVSL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69570.1	1e-09	Dof family protein

Link Out ? help Back to Top
Phytozome	MDP0000252038