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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MDP0000248957 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
C2H2 |
Protein Properties |
Length: 669aa MW: 74123.5 Da PI: 9.9202 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000248957 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 15.7 | 4.4e-05 | 312 | 334 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++Cp+Cg+sF++ ++ +H ++
MDP0000248957 312 FECPICGQSFRSEDEVSVHVDSC 334
89*****************8776 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 669 aa
Download sequence Send
to blast |
PEKRAAQRSD GVGVGCPRVR RCRGGDHGAP PHDPRPRRPP QGPRHCHPQP PQTVALSGAV 60 VPLLAHGHLL EVRDSPELRR RLLHSLGVPP PPEVDHEEPA QRALDRRRLD LLLAPLHRHP 120 PRCPHRAVEP ARRALEESRL NPLGKEKQKR ACEGRKAVWR GKLSNEHRLL FFFFFFQYID 180 MKDKFKGFMK NTFSSSSSGK FKGQGRVLGS SSSSGPADSV LIRPKQTPHS NPKPVPNSNS 240 NSNSSVASPN PKPSPQKTQI IHQEKAQIPD QSQAEPSFNS KPDRKTETGF DPFDALITPG 300 KRSQNGFTLN VFECPICGQS FRSEDEVSVH VDSCANTSVE NKSVEGVGVS RSPDNGSESS 360 RSELEARIGT FSSGNPAAGS VEVVLRLLRN IVKEPENVKF RRIRMSNPKI RESLGEVVGG 420 IELLEFVGFE LKEEDGEMWA VMEVPREEQI NLMKRGIALL EPPKVQEVDI SASIASLKVD 480 EPVEPRKVDR QTRVFFSVSE SVAARIEVPA SFYNLSATEL KREAEMRKKK IEDSQMLIPK 540 SFKEKQAKAA KRRYRKTVIR IQFPDGVVLQ GVFSPLEPTS SLYEYVSSAL KEPSLEFELL 600 NPVALKRRVI PHFPAAGKKA ATLADEDLMP SALVKFKPIE TDSVVFTGLC NDLLEISEPL 660 TSGSAAAPV
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Functional Description ? help
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Source |
Description |
UniProt | Facilitates the interaction of SYP31 and CDC48A, thereby regulating an CDC48A membrane-associated function (Ref.8). Appears to act as a negative regulator mediating the powdery mildew-plant interaction (PubMed:19176722, PubMed:23301616). {ECO:0000269|PubMed:19176722, ECO:0000269|PubMed:23301616, ECO:0000269|Ref.8}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced in response to powdery mildew and by benzothiadiazole (BTH) treatment. {ECO:0000269|PubMed:19176722}. |
Publications
? help Back to Top |
- Suzuki T,Park H,Till EA,Lennarz WJ
The PUB domain: a putative protein-protein interaction domain implicated in the ubiquitin-proteasome pathway. Biochem. Biophys. Res. Commun., 2001. 287(5): p. 1083-7 [PMID:11587532] - Rancour DM,Park S,Knight SD,Bednarek SY
Plant UBX domain-containing protein 1, PUX1, regulates the oligomeric structure and activity of arabidopsis CDC48. J. Biol. Chem., 2004. 279(52): p. 54264-74 [PMID:15498773] - Chandran D,Rickert J,Cherk C,Dotson BR,Wildermuth MC
Host cell ploidy underlying the fungal feeding site is a determinant of powdery mildew growth and reproduction. Mol. Plant Microbe Interact., 2013. 26(5): p. 537-45 [PMID:23301616]
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