PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MDP0000247912 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family | bHLH | ||||||||
Protein Properties | Length: 1134aa MW: 122866 Da PI: 5.9366 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.4 | 3.9e-11 | 619 | 661 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L MDP0000247912 619 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 661 79*********************66......****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.40.50.720 | 3.6E-76 | 11 | 280 | IPR016040 | NAD(P)-binding domain |
SuperFamily | SSF51735 | 8.0E-72 | 15 | 265 | IPR016040 | NAD(P)-binding domain |
PRINTS | PR00081 | 1.9E-31 | 18 | 35 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
Pfam | PF13561 | 2.3E-60 | 23 | 264 | No hit | No description |
PRINTS | PR00081 | 1.9E-31 | 89 | 100 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00080 | 5.3E-6 | 89 | 100 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00081 | 1.9E-31 | 139 | 155 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00080 | 5.3E-6 | 145 | 153 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00081 | 1.9E-31 | 165 | 184 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00080 | 5.3E-6 | 165 | 184 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00081 | 1.9E-31 | 186 | 203 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PRINTS | PR00081 | 1.9E-31 | 229 | 249 | IPR002347 | Short-chain dehydrogenase/reductase SDR |
PROSITE profile | PS50888 | 15.682 | 612 | 661 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.97E-16 | 615 | 680 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.2E-14 | 618 | 667 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.1E-9 | 618 | 661 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.52E-12 | 619 | 665 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 3.5E-15 | 619 | 674 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 8.70E-7 | 731 | 772 | No hit | No description |
Gene3D | G3DSA:3.40.1160.10 | 1.6E-32 | 879 | 926 | IPR001048 | Aspartate/glutamate/uridylate kinase |
Pfam | PF00696 | 1.4E-21 | 879 | 1132 | IPR001048 | Aspartate/glutamate/uridylate kinase |
PROSITE pattern | PS00324 | 0 | 881 | 889 | IPR018042 | Aspartate kinase, conserved site |
SuperFamily | SSF53633 | 6.84E-36 | 881 | 1132 | IPR001048 | Aspartate/glutamate/uridylate kinase |
Gene3D | G3DSA:3.40.1160.10 | 1.6E-32 | 1001 | 1134 | IPR001048 | Aspartate/glutamate/uridylate kinase |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008652 | Biological Process | cellular amino acid biosynthetic process | ||||
GO:0004072 | Molecular Function | aspartate kinase activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 1134 aa Download sequence Send to blast |
MPFSTFGASG HGRLEGKVAI ITGSASGLGK ATAHEFIRHG AHVIIADSDS ELGPQVAKEL 60 GPAAYFVQCD VTIESQIAEA VETAMARHGK LDIMYNNAGI TGPAFPPSIA DLNLEEFDRV 120 IRVNLRGAVA GIKHAARVMK PAGSGSILCT SSIAGLLGGL GPHSYSISKF TIPGLVKSLA 180 SELCRNGIRV NCISPGPIPT PMAVREIKQF YPGATEEQVK EIVNGLGELK GAKCEEIDVA 240 QAAVYLASDE AKYVTGHNLV LDGGTFFEFT PQRHIFREEE SEAIDITNNG AACMGGDEHX 300 AASWTRNNNN NEAEPRRNDQ DSSLGVSFSN VKLMLEGDWY TNNILSNPAQ DLHTFSSTQA 360 SETTFAPLQP NDSSASCSXS QAFSIDSSQP SQQFLPPKSC FSSLLNVVCS NPLDSSFDLG 420 CDAGFLGSFQ GNQPSKSSLL MGFTALNSHS QMGTPEFSSS AEFPASRLLP VTDNANILDG 480 DFGFEGFDGS AGAQLLNGAK LLFPPMGAQP TLFQKRRQNS GGDGADKLGN LEISAPRYGG 540 LVENLEKKRX NXEGEVEEES LDVSGLNYDS NDFNEHSQVE VEDNAKNGGN NSNANCTVTG 600 VEGGDRKGKK KGLPAKNLMA ERRRRKKLND RLYMLRSVVP KISKMDRASI LGDAIDYLKE 660 LLQRINDLHN ELDSAPPSSL LPPSTSFHPL TPPPSTLPCR VKEELCPSSL PSPKTQPKVE 720 VRVREGRTVN IHMFCARRPG LFLSTMRALD NLDLDIQQAV ISCFNGFALD VFRAELCTPF 780 TSFVEITSFR METALHFSRV KTLCPASPER SLRFKQPLWS QSLRFATGVA SSNGFFASAK 840 SFSCTSRVLR VSCEGGIADV LEKKQTDNQS LGDNEKQLTC VMKFGGSSVA TAERMREVAD 900 LILSFPQERP VIVLSAMGKT TNKLLLAGEK AVTCGVTNVS MIDELSFIKE LHLRKNNSIF 960 DFLTVHHPIL NRTVEELGVD SSIISSHLEE LEQLLKGIAM MKELTLRTKD YLVSFGECMS 1020 TRLFAAYLNK IGVKARQYDA FEIGFITTDD FTNADILEAT YPAVAKRVQG DWICDPAIPI 1080 VTGFLGKVSL LANFNMYSVF EKGWKSCAVT TLGRGGSDLT ATTLGKALGL REIQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2cdq_A | 1e-120 | 860 | 1134 | 10 | 250 | ASPARTOKINASE |
2cdq_B | 1e-120 | 860 | 1134 | 10 | 250 | ASPARTOKINASE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 608 | 626 | KKKGLPAKNLMAERRRRKK |
2 | 620 | 627 | ERRRRKKL |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mdo.15409 | 1e-162 | bud| leaf |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A498HE06 | 0.0 | A0A498HE06_MALDO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2414 | 34 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.4 | 3e-93 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | MDP0000247912 |