PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000239688
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 854aa    MW: 95687.8 Da    PI: 8.0468
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000239688genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1506.2e-16444506163
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    e++ kre+rkq NRe+ArrsR+RK+ae eeL + +++L ae +aL++++++lk+ +++l+ e+
  MDP0000239688 444 ERQMKREKRKQANRESARRSRLRKQAEYEELVKTCESLNAEKMALQSKIKKLKEDSETLRLEN 506
                    799*******************************************************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF133342.0E-71795IPR025298Domain of unknown function DUF4094
PfamPF017621.2E-33129324IPR002659Glycosyl transferase, family 31
Gene3DG3DSA:1.20.5.1702.3E-12442503No hitNo description
SMARTSM003388.0E-13444508IPR004827Basic-leucine zipper domain
PfamPF001703.2E-14444506IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.484446509IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-8447503No hitNo description
CDDcd147026.62E-16449497No hitNo description
PROSITE patternPS000360451466IPR004827Basic-leucine zipper domain
SuperFamilySSF746504.33E-65588848IPR011013Galactose mutarotase-like domain
Gene3DG3DSA:2.70.98.103.6E-96589850IPR014718Glycoside hydrolase-type carbohydrate-binding
CDDcd090202.07E-106590849No hitNo description
PfamPF012635.5E-63590848IPR008183Aldose 1-/Glucose-6-phosphate 1-epimerase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006486Biological Processprotein glycosylation
GO:0005768Cellular Componentendosome
GO:0005802Cellular Componenttrans-Golgi network
GO:0016020Cellular Componentmembrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016853Molecular Functionisomerase activity
GO:0030246Molecular Functioncarbohydrate binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:1990714Molecular Functionhydroxyproline O-galactosyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 854 aa     Download sequence    Send to blast
MHSRPSHNRL SGSAFHSRIS ALLLAMVSTM AAIYVAGRLW QDAADRVYLI QELDKRNGQG  60
QSAIAVDDTL KIIDCREQQK QLSALEMQLA GARQEGFIPK SLSKNEGAHS KKKLVAVIGI  120
ITTFGRKKNR EAIRKAWMPT GEALKRLADE KGIIVRFVIG RSPNRGDSLD KEIDKENDRT  180
NDFIILDDQV EASEERPKKT KLLYIHAVEN WDAEFYVKVN DDVYVNLDVL GATLTTYIDK  240
PRVYIGCMKS GEVFSEPTHK WYEPDWWKFG DAKSYFRHAS GELYAISRAL AQFISINRSI  300
LHAYAHDDVS AGSWFIGLDV KHIDERKFCC SSWMPDRYNI EKRRPREGDH RPMSLHAEHF  360
TQRNNGSESM QSAENDVKVH TQVSPTTKGE TNENSKSVSG TAPPAVGYVG ASLRPPYETI  420
GISTAFVAPS AGSGLPFGAP VLDERQMKRE KRKQANRESA RRSRLRKQAE YEELVKTCES  480
LNAEKMALQS KIKKLKEDSE TLRLENAALR VLLNVLVEFL ELLEKLKNAQ AVTQGGIASV  540
KIEVDLELPN DAKNIISNLG SPHITLGGLK NLINLTSGLR PAGGIQGIPV SLHGGQVLSW  600
KTERGEELLF TSSKAIFKPP KAVRGGIPIC FPQVGTGSLD QNGFARNRIW AIDNDPPPLH  660
PNDSNGKAYI DLLLKPSDDD LKIWPHSFEF RLRVSLAAEG HLTLISRIRN INSKPFSFSF  720
AFHTYFSISD ISEVRVEGLE TLDYLDNLCQ KERFTEQGDA LTFESEVDRA YLKSSDVIAV  780
FDHEKKRTFT VRKEGLPDVV VWNPWEKSKA MADLGDEEYK QMLCVNGASI EKPITLKPGE  840
EWTGRLELSV VPSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ciq_A8e-3458084414282HEXOSE-6-PHOSPHATE MUTAROTASE
2cir_A8e-3458084414282HEXOSE-6-PHOSPHATE MUTAROTASE
2cis_A8e-3458084414282GLUCOSE-6-PHOSPHATE 1-EPIMERASE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1460466RRSRLRK
2460467RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.133180.0bud| fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.22e-16G-box binding factor 3