 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MDP0000231668 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
WRKY |
| Protein Properties |
Length: 342aa MW: 37168.1 Da PI: 9.5159 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000231668 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.9 | 1.5e-31 | 270 | 327 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+
MDP0000231668 270 DDYSWRKYGQKPIKGSPYPRGYYKCSSErGCLARKHVERAVDDPTMLIVTYEGDHNHS 327
99*************************99****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MALELMMGLI DSFAAKGEEN AVKEAASAGI QSVEKFISLI SQHHHQSLSS NTEDATEYKA 60
VADMAVTKFR KVISLLDKGR TGHARFRKAP VTQIPTPSIS EPHDQETEQP SVFRTEQSSA 120
FKVYCPTPVV XLPPLPQNPH PKTTPVMLTK GIGCAERKMD SAAAATISFS PSAPKTAANS 180
FISSLTAGDA AEQSISSGFQ FTNMSQSSSG RPPLSSSSLK RKCSSVDNVS RLRCGSTTGR 240
CHCSKTRKLK VKRVIRVPAI SMKLADIPPD DYSWRKYGQK PIKGSPYPRG YYKCSSERGC 300
LARKHVERAV DDPTMLIVTY EGDHNHSLCV TDPTATLILE SS
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
