|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MDP0000229007 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
Family |
bHLH |
Protein Properties |
Length: 325aa MW: 36289.4 Da PI: 6.655 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000229007 | genome | GDR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 41.5 | 2.4e-13 | 116 | 167 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N ++ Lr+++P + ++++ + a+i A++++k+L+
MDP0000229007 116 QRMTHIAVERNRRKQMNVYLAALRSMMPAP---YAQRGDQASIIGGAINFVKELE 167
79****************************...*******************995 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MTLEAVVFQE EQYSXGWKDS QAIGGGGGGG GSWSHGFDFG EEDHQEESNK VGQQGFNMSL 60 DSSPSSMVQS VNDFDKNNGS AFNHVFPSIE ALAATTGRKK RKRIRSIKNK EFMETQRMTH 120 IAVERNRRKQ MNVYLAALRS MMPAPYAQRG DQASIIGGAI NFVKELEQLL QSIEGQRRTN 180 QQSDHHLNFA SIFSSFFAFP QYSNCSTNHG HGLYNNSSIE LSNELTAEKR SSAIADVEVS 240 MAESHANIKV LVKKQPRQLL NMVLGLHSLR FMILHLNVTT VDSMILYSFS VKIEDNSQLT 300 SVNEIAADVY EMVGRIQEEA QHLAQ
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 97 | 102 | RKKRKR |
2 | 116 | 127 | RMTHIAVERNRR |