PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000208334
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 314aa    MW: 34715.8 Da    PI: 6.3234
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000208334genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.12.2e-14232286357
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                    + +r++r++kNRe+A rsR+RK+a+++eLe  +  Le+eN++L ke  e ++   
  MDP0000208334 232 SQQRQKRMIKNRESAARSRERKQAYQDELESLAVRLEEENEQLLKEQAEQTQXRL 286
                    679**************************************99987665555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.4E-14226291No hitNo description
SMARTSM003389.4E-13230294IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.806232277IPR004827Basic-leucine zipper domain
PfamPF001701.5E-12232281IPR004827Basic-leucine zipper domain
CDDcd147078.28E-19234283No hitNo description
SuperFamilySSF579591.19E-9234284No hitNo description
PROSITE patternPS000360237252IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MASSKLMSSS SSSRSRNSDL SRRPSSNFSP ATKPQPTTTT AHPSSSSAHP QSLNNYQNSN  60
TSTTXAFPIG SITVDGLLYD SNPTPMTDAT LLNAQITLLD SSAEINSSTA PPXPKTVDEV  120
WREIVSGECR KECKEEVPDE MMTLEDFLAR AGAVEENDIK DFPLAPPPPE TERLSSGVFS  180
FDQIPLSPFG SIDKVEGSIV GFGNXADPAG SGGGVGRRKR GRAVMEPMDK ASQQRQKRMI  240
KNRESAARSR ERKQAYQDEL ESLAVRLEEE NEQLLKEQAE QTQXRLKQLM ENIIPVVEKR  300
RPPHVLRRVR SLQW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008381825.20.0G-box-binding factor 4-like
TrEMBLA0A498IQR60.0A0A498IQR6_MALDO; Uncharacterized protein
STRINGXP_008381825.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-57bZIP family protein