PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000203462
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family BES1
Protein Properties Length: 103aa    MW: 11572.4 Da    PI: 9.6556
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000203462genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822159.81.8e-49576172
         DUF822  1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkg 72
                   g+sgr ptwkErEnnkrRERrRRaiaak+y+GLRaqG yklpk++DnneVlkALc+eAGwvve+DGttyrk 
  MDP0000203462  5 GSSGRLPTWKERENNKRRERRRRAIAAKMYSGLRAQGSYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKI 76
                   689*******************************************************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.8E-45677IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    Send to blast
MTGGGSSGRL PTWKERENNK RRERRRRAIA AKMYSGLRAQ GSYKLPKHCD NNEVLKALCA  60
EAGWVVEEDG TTYRKISACK IILDLVLVDF VNPCFLVEIP AGF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A9e-26980372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B9e-26980372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C9e-26980372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D9e-26980372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.121301e-104bud| cell culture| fruit| leaf| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008338783.27e-36BES1/BZR1 homolog protein 2-like
RefseqXP_010675300.13e-36PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9S7F33e-28BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBLA0A2P6RMR52e-45A0A2P6RMR5_ROSCH; Putative transcription factor BES/BZR family
STRINGXP_010675300.11e-35(Beta vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF151521113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.14e-30BES1/BZR1 homolog 1