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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MDP0000199939 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
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Family |
MYB |
Protein Properties |
Length: 529aa MW: 59702.9 Da PI: 7.1142 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MDP0000199939 | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 45.6 | 1.6e-14 | 237 | 283 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEd lv++v ++G + W+ Ia+ + gR +kqc++rw+++l
MDP0000199939 237 KGQWSPEEDRHLVQLVGRFGIKKWSHIANQLT-GRVGKQCRERWHNHL 283
799****************************9.*************97 PP
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2 | Myb_DNA-binding | 50.7 | 4.2e-16 | 291 | 331 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
W++eEd++l++a+k++G++ W+ a+ ++ gRt++ +k++w+
MDP0000199939 291 MWSEEEDKILIEAHKKMGNR-WAEMAKILP-GRTENTIKNHWN 331
6*******************.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 529 aa
Download sequence Send
to blast |
MEYLETNLRE LDNFPLISTL LYGSSNPLKL MKPENPPPTT IKTTTXDGNL YSLSRSSPSP 60 PSSPKALFHH PNSINHGFNR ISHSHEYNLT PKTDHFTTTE AGSSSNPFSK ISTTCNTLNN 120 PFEXSPYTPN YHRHHFVTSD CGEXELVAMH GFHGGVRGCL GYPPDHQEIP HDQQMGAESC 180 VQLPPLVIYG EFGSSSAPAM RLHSDDIPRL SADEKKNKRL CEGGAIKLLH KKPDIIKGQW 240 SPEEDRHLVQ LVGRFGIKKW SHIANQLTGR VGKQCRERWH NHLRPDIRKE MWSEEEDKIL 300 IEAHKKMGNR WAEMAKILPG RTENTIKNHW NATKRKQNSK RKSNKQDSSN NNYNESSMLQ 360 DYIRTVVNST XTGTPSTASA NSTGTMENKA VLSSVVSPDH QSGMHINQNX IVESPDATNS 420 ANWDLTGYRP EPFDSEASNM NNHMGDGVTT LSDXDKSNMF NIFESYGLGG YLQQRMASSS 480 TSRVKDPSCS MEYELXFFPL EMNNFMQGHD DHVKKELDIM EMLHFKGNM
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