 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MDP0000199184 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
|
| Family |
Trihelix |
| Protein Properties |
Length: 323aa MW: 36742.4 Da PI: 7.7844 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MDP0000199184 | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 31.6 | 4.4e-10 | 37 | 107 | 8 | 79 |
trihelix 8 laLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79
l L++ + +e + ++ + ++W+ +++++ + g++r+ q + kwe l ++yk ik++e k ++ +s +
MDP0000199184 37 LILVNEVAAVEGDCLKALSSFQKWKIIAQNCFALGVSRTLDQYRRKWEALFGEYKGIKQWEAKSRASDS-YW 107
5666666677777777788889****************************************9754444.55 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MKPEQTPSXL DRSHRSSGNR RSTRSQAAPD WNPTDELILV NEVAAVEGDC LKALSSFQKW 60
KIIAQNCFAL GVSRTLDQYR RKWEALFGEY KGIKQWEAKS RASDSYWVLG IERRKRNGLP 120
ENFDQELFRG IEKLVRVRGN QSDTDPDSDP EDEAEEEPDV DSEPESKRRR RRSTSKKSXP 180
RENSIRSCKR EKPQETHAEE KPQKTXAEEK PVGSGLKAIP PKSLAEEHPQ KSCVKKKLTN 240
SQRKEEAISI EEQEKIAAMK LHESADLIRA IVTETPDHKA AGVKSTGDLQ TDFVRCQGDR 300
VIACLGDIVK TLDQLRHLVQ ECE
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G31270.1 | 2e-49 | sequence-specific DNA binding transcription factors |
